Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.73■□□□□ 0.436e-7■□□□□ 11
CSTF2P33240 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.346e-7■□□□□ 11
CSTF2P33240 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.316e-7■□□□□ 11
CSTF2P33240 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)16.85■□□□□ 0.296e-7■□□□□ 11
CSTF2P33240 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.17■□□□□ 0.186e-7■□□□□ 11
CSTF2P33240 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.126e-7■□□□□ 11
CSTF2P33240 SMAP2-201ENST00000372708 2473 ntTSL 1 (best)9.42□□□□□ -0.96e-7■□□□□ 11
CSTF2P33240 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.6□□□□□ -1.036e-7■□□□□ 11
CSTF2P33240 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.8□□□□□ -1.166e-7■□□□□ 11
CSTF2P33240 SMAP2-203ENST00000435168 666 ntTSL 56.28□□□□□ -1.46e-7■□□□□ 11
CSTF2P33240 YAP1-205ENST00000526594 785 ntTSL 34.24□□□□□ -1.736e-7■□□□□ 11
CSTF2P33240 LUC7L2-207ENST00000498518 2837 ntTSL 24.09□□□□□ -1.756e-7■□□□□ 11
CSTF2P33240 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC10.2□□□□□ -0.782e-8■□□□□ 10.9
CSTF2P33240 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9.16□□□□□ -0.942e-8■□□□□ 10.9
CSTF2P33240 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.962e-8■□□□□ 10.9
CSTF2P33240 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.81□□□□□ -12e-8■□□□□ 10.9
CSTF2P33240 CLASP1-207ENST00000452274 3966 ntTSL 58.47□□□□□ -1.052e-8■□□□□ 10.9
CSTF2P33240 CLASP1-212ENST00000480007 569 ntTSL 48.43□□□□□ -1.062e-8■□□□□ 10.9
CSTF2P33240 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.21□□□□□ -1.092e-8■□□□□ 10.9
CSTF2P33240 CLASP1-211ENST00000474065 516 ntTSL 37.28□□□□□ -1.242e-8■□□□□ 10.9
CSTF2P33240 CLASP1-205ENST00000430234 582 ntTSL 46.62□□□□□ -1.352e-8■□□□□ 10.9
CSTF2P33240 CLASP1-204ENST00000418989 663 ntTSL 45.55□□□□□ -1.522e-8■□□□□ 10.9
CSTF2P33240 CLASP1-206ENST00000449975 555 ntTSL 45.51□□□□□ -1.532e-8■□□□□ 10.9
CSTF2P33240 SUPT16H-203ENST00000555752 888 ntTSL 218.99■□□□□ 0.631e-6■□□□□ 10.9
CSTF2P33240 SUPT16H-205ENST00000556217 1027 ntTSL 215.44■□□□□ 0.061e-6■□□□□ 10.9
CSTF2P33240 SUPT16H-208ENST00000557652 877 ntTSL 513.62□□□□□ -0.231e-6■□□□□ 10.9
CSTF2P33240 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.051e-6■□□□□ 10.9
CSTF2P33240 SUPT16H-206ENST00000556309 582 ntTSL 33.14□□□□□ -1.911e-6■□□□□ 10.9
CSTF2P33240 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.122e-6■□□□□ 10.9
CSTF2P33240 HS3ST3B1-202ENST00000466596 2808 ntTSL 214.28□□□□□ -0.122e-6■□□□□ 10.9
CSTF2P33240 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.99■□□□□ 0.152e-7■□□□□ 10.9
CSTF2P33240 ASXL1-204ENST00000470145 1073 ntTSL 59.57□□□□□ -0.882e-7■□□□□ 10.9
CSTF2P33240 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.73□□□□□ -1.652e-7■□□□□ 10.9
CSTF2P33240 ARL6IP6-205ENST00000495469 1308 ntTSL 220.61■□□□□ 0.898e-10■□□□□ 10.9
CSTF2P33240 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.168e-10■□□□□ 10.9
CSTF2P33240 ARL6IP6-202ENST00000425034 465 ntTSL 23.63□□□□□ -1.838e-10■□□□□ 10.9
CSTF2P33240 ARL6IP6-203ENST00000455875 479 ntTSL 22.88□□□□□ -1.958e-10■□□□□ 10.9
CSTF2P33240 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.035e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-204ENST00000428005 1572 ntTSL 1 (best)21.56■■□□□ 1.041e-6■□□□□ 10.9
CSTF2P33240 CDC27-203ENST00000526866 1420 ntTSL 218.42■□□□□ 0.541e-6■□□□□ 10.9
CSTF2P33240 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.061e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-208ENST00000437266 3407 ntTSL 1 (best)14.6□□□□□ -0.071e-6■□□□□ 10.9
CSTF2P33240 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.56□□□□□ -0.081e-6■□□□□ 10.9
CSTF2P33240 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.54□□□□□ -0.081e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.121e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.22□□□□□ -0.131e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.21e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-209ENST00000438530 3825 ntTSL 1 (best)13.56□□□□□ -0.241e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.55□□□□□ -0.241e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.241e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-215ENST00000457377 3600 ntTSL 1 (best)13.47□□□□□ -0.251e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.36□□□□□ -0.271e-6■□□□□ 10.9
CSTF2P33240 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.76□□□□□ -0.371e-6■□□□□ 10.9
CSTF2P33240 CDC27-210ENST00000533415 2570 ntTSL 212.52□□□□□ -0.411e-6■□□□□ 10.9
CSTF2P33240 PATZ1-206ENST00000494109 835 ntTSL 211.53□□□□□ -0.561e-6■□□□□ 10.9
CSTF2P33240 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.031e-6■□□□□ 10.9
CSTF2P33240 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.161e-6■□□□□ 10.9
CSTF2P33240 ZNF148-210ENST00000497929 2381 ntTSL 54.89□□□□□ -1.631e-6■□□□□ 10.9
CSTF2P33240 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.851e-6■□□□□ 10.9
CSTF2P33240 CDC27-213ENST00000571643 716 ntTSL 33.34□□□□□ -1.871e-6■□□□□ 10.9
CSTF2P33240 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.25■□□□□ 0.032e-12■□□□□ 10.9
CSTF2P33240 SERF2-211ENST00000430901 483 ntTSL 414.5□□□□□ -0.092e-12■□□□□ 10.9
CSTF2P33240 SERF2-208ENST00000409617 700 ntTSL 214.3□□□□□ -0.122e-12■□□□□ 10.9
CSTF2P33240 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.26□□□□□ -0.132e-12■□□□□ 10.9
CSTF2P33240 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.05□□□□□ -0.322e-12■□□□□ 10.9
CSTF2P33240 SERF2-213ENST00000448830 2792 ntTSL 212.6□□□□□ -0.392e-12■□□□□ 10.9
CSTF2P33240 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.462e-12■□□□□ 10.9
CSTF2P33240 ARID1B-235ENST00000638000 1401 ntTSL 57.94□□□□□ -1.142e-6■□□□□ 10.8
CSTF2P33240 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.99e-8■□□□□ 10.8
CSTF2P33240 ANKRD11-213ENST00000567736 2750 ntTSL 214.19□□□□□ -0.141e-7■□□□□ 10.8
CSTF2P33240 TCF20-204ENST00000515426 633 ntTSL 516.96■□□□□ 0.319e-7■□□□□ 10.8
CSTF2P33240 TMCC1-212ENST00000512902 533 ntTSL 316.4■□□□□ 0.229e-7■□□□□ 10.8
CSTF2P33240 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC12.57□□□□□ -0.49e-7■□□□□ 10.8
CSTF2P33240 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.14□□□□□ -0.479e-7■□□□□ 10.8
CSTF2P33240 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC11.51□□□□□ -0.579e-7■□□□□ 10.8
CSTF2P33240 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.589e-7■□□□□ 10.8
CSTF2P33240 TMCC1-205ENST00000505616 402 ntTSL 210.16□□□□□ -0.789e-7■□□□□ 10.8
CSTF2P33240 TMCC1-213ENST00000513411 203 ntTSL 36.45□□□□□ -1.389e-7■□□□□ 10.8
CSTF2P33240 TMCC1-206ENST00000505924 665 ntTSL 56.12□□□□□ -1.439e-7■□□□□ 10.8
CSTF2P33240 MREG-204ENST00000439791 576 ntTSL 45.65□□□□□ -1.52e-12■□□□□ 10.8
CSTF2P33240 AC083799.1-201ENST00000366451 910 ntBASIC5.52□□□□□ -1.539e-7■□□□□ 10.8
CSTF2P33240 MREG-203ENST00000424992 560 ntTSL 54.62□□□□□ -1.672e-12■□□□□ 10.8
CSTF2P33240 MREG-202ENST00000420348 584 ntTSL 44.6□□□□□ -1.672e-12■□□□□ 10.8
CSTF2P33240 TMCC1-208ENST00000508869 467 ntTSL 33.5□□□□□ -1.859e-7■□□□□ 10.8
CSTF2P33240 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.63■□□□□ 0.093e-6■□□□□ 10.7
CSTF2P33240 RAB30-AS1-201ENST00000501011 607 ntTSL 1 (best)11.85□□□□□ -0.513e-6■□□□□ 10.7
CSTF2P33240 RAB30-AS1-203ENST00000527627 504 ntTSL 311.85□□□□□ -0.513e-6■□□□□ 10.7
CSTF2P33240 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC11.6□□□□□ -0.553e-6■□□□□ 10.7
CSTF2P33240 RAB30-AS1-206ENST00000533528 340 ntTSL 510.21□□□□□ -0.773e-6■□□□□ 10.7
CSTF2P33240 IRX3-202ENST00000558054 444 ntTSL 29.39□□□□□ -0.913e-6■□□□□ 10.7
CSTF2P33240 FIGN-203ENST00000482917 600 ntTSL 57.61□□□□□ -1.193e-7■□□□□ 10.7
CSTF2P33240 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.413e-7■□□□□ 10.7
CSTF2P33240 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.07□□□□□ -1.443e-7■□□□□ 10.7
CSTF2P33240 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.553e-6■□□□□ 10.7
CSTF2P33240 CBX4-203ENST00000494546 432 ntTSL 332.65■■■□□ 2.823e-7■□□□□ 10.7
CSTF2P33240 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.04■■■□□ 2.083e-7■□□□□ 10.7
CSTF2P33240 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.793e-7■□□□□ 10.7
CSTF2P33240 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.191e-7■□□□□ 10.7
CSTF2P33240 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.151e-7■□□□□ 10.7
CSTF2P33240 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.86□□□□□ -0.191e-6■□□□□ 10.7
Retrieved 100 of 6,735 protein–RNA pairs in 170.9 ms