RNA–Protein interactions for RNA: ENST00000474065.5

CLASP1-211, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 3

Gene CLASP1, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-211ENST00000474065 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
CLASP1-211ENST00000474065 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
CLASP1-211ENST00000474065 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CLASP1-211ENST00000474065 PHF23Q9BUL5 403 aaPredicted RBP19.93■□□□□ 0.78
CLASP1-211ENST00000474065 FOXD1Q16676 465 aa18.81■□□□□ 0.6
CLASP1-211ENST00000474065 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
CLASP1-211ENST00000474065 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
CLASP1-211ENST00000474065 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
CLASP1-211ENST00000474065 MSH5O43196 834 aa17.58■□□□□ 0.4
CLASP1-211ENST00000474065 PIAS4Q8N2W9 510 aaPredicted RBP17.55■□□□□ 0.4
CLASP1-211ENST00000474065 ADRA2BP18089 450 aa17.54■□□□□ 0.4
CLASP1-211ENST00000474065 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
CLASP1-211ENST00000474065 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
CLASP1-211ENST00000474065 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
CLASP1-211ENST00000474065 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
CLASP1-211ENST00000474065 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
CLASP1-211ENST00000474065 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
CLASP1-211ENST00000474065 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
CLASP1-211ENST00000474065 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
CLASP1-211ENST00000474065 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
CLASP1-211ENST00000474065 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
CLASP1-211ENST00000474065 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
CLASP1-211ENST00000474065 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
CLASP1-211ENST00000474065 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
CLASP1-211ENST00000474065 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
CLASP1-211ENST00000474065 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
CLASP1-211ENST00000474065 ABCC9O60706 1549 aa14.92□□□□□ -0.02
CLASP1-211ENST00000474065 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
CLASP1-211ENST00000474065 C1QBPQ07021 282 aaKnown RBP14.8□□□□□ -0.04
CLASP1-211ENST00000474065 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
CLASP1-211ENST00000474065 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
CLASP1-211ENST00000474065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.064e-7■■□□□ 12.9
CLASP1-211ENST00000474065 NACADO15069 1562 aa14.66□□□□□ -0.06
CLASP1-211ENST00000474065 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
CLASP1-211ENST00000474065 KCNA4P22459 653 aa14.65□□□□□ -0.06
CLASP1-211ENST00000474065 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
CLASP1-211ENST00000474065 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
CLASP1-211ENST00000474065 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
CLASP1-211ENST00000474065 SCRIBQ14160 1630 aa14.22□□□□□ -0.13
CLASP1-211ENST00000474065 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
CLASP1-211ENST00000474065 CAPN15O75808 1086 aa14.12□□□□□ -0.15
CLASP1-211ENST00000474065 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
CLASP1-211ENST00000474065 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
CLASP1-211ENST00000474065 DSG3P32926 999 aa14.07□□□□□ -0.16
CLASP1-211ENST00000474065 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
CLASP1-211ENST00000474065 APLP2Q06481 763 aa13.98□□□□□ -0.17
CLASP1-211ENST00000474065 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLASP1-211ENST00000474065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
CLASP1-211ENST00000474065 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
CLASP1-211ENST00000474065 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
CLASP1-211ENST00000474065 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
CLASP1-211ENST00000474065 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
CLASP1-211ENST00000474065 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
CLASP1-211ENST00000474065 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
CLASP1-211ENST00000474065 ABCB7O75027 752 aa13.78□□□□□ -0.2
CLASP1-211ENST00000474065 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
CLASP1-211ENST00000474065 CECR2Q9BXF3 1484 aa13.68□□□□□ -0.22
CLASP1-211ENST00000474065 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
CLASP1-211ENST00000474065 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
CLASP1-211ENST00000474065 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
CLASP1-211ENST00000474065 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
CLASP1-211ENST00000474065 RSF1Q96T23 1441 aaPredicted RBP13.59□□□□□ -0.23
CLASP1-211ENST00000474065 SMARCA2P51531 1590 aa13.58□□□□□ -0.23
CLASP1-211ENST00000474065 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
CLASP1-211ENST00000474065 POLA2Q14181 598 aa13.56□□□□□ -0.24
CLASP1-211ENST00000474065 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
CLASP1-211ENST00000474065 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
CLASP1-211ENST00000474065 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
CLASP1-211ENST00000474065 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
CLASP1-211ENST00000474065 HMGXB3Q12766 1538 aa13.47□□□□□ -0.25
CLASP1-211ENST00000474065 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
CLASP1-211ENST00000474065 ZBTB22O15209 634 aa13.46□□□□□ -0.25
CLASP1-211ENST00000474065 BAZ1BQ9UIG0 1483 aaKnown RBP13.46□□□□□ -0.25
CLASP1-211ENST00000474065 WIZO95785 1651 aa13.45□□□□□ -0.26
CLASP1-211ENST00000474065 POTEHQ6S545 545 aa13.43□□□□□ -0.26
CLASP1-211ENST00000474065 TOP2AP11388 1531 aaKnown RBP13.41□□□□□ -0.26
CLASP1-211ENST00000474065 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
CLASP1-211ENST00000474065 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
CLASP1-211ENST00000474065 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
CLASP1-211ENST00000474065 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
CLASP1-211ENST00000474065 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
CLASP1-211ENST00000474065 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
CLASP1-211ENST00000474065 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
CLASP1-211ENST00000474065 CFTRP13569 1480 aa13.1□□□□□ -0.31
CLASP1-211ENST00000474065 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
CLASP1-211ENST00000474065 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
CLASP1-211ENST00000474065 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
CLASP1-211ENST00000474065 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
CLASP1-211ENST00000474065 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
CLASP1-211ENST00000474065 NESP48681 1621 aa12.97□□□□□ -0.33
CLASP1-211ENST00000474065 FBLN2P98095 1184 aa12.95□□□□□ -0.34
CLASP1-211ENST00000474065 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
CLASP1-211ENST00000474065 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
CLASP1-211ENST00000474065 ERCC6Q03468 1493 aa12.92□□□□□ -0.34
CLASP1-211ENST00000474065 ABCC8Q09428 1581 aa12.9□□□□□ -0.35
CLASP1-211ENST00000474065 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
CLASP1-211ENST00000474065 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
CLASP1-211ENST00000474065 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
CLASP1-211ENST00000474065 MKRN4PQ13434 485 aaPredicted RBP12.87□□□□□ -0.35
CLASP1-211ENST00000474065 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms