RNA–Protein interactions for RNA: ENST00000513411.5

TMCC1-213, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 3

Gene TMCC1, Length 203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-213ENST00000513411 NISCHQ9Y2I1 1504 aa14.32□□□□□ -0.12
TMCC1-213ENST00000513411 CCDC180Q9P1Z9 1646 aa12.32□□□□□ -0.44
TMCC1-213ENST00000513411 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
TMCC1-213ENST00000513411 SHROOM4Q9ULL8 1493 aa11.96□□□□□ -0.49
TMCC1-213ENST00000513411 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
TMCC1-213ENST00000513411 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
TMCC1-213ENST00000513411 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
TMCC1-213ENST00000513411 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
TMCC1-213ENST00000513411 CHIC1Q5VXU3 224 aa11.43□□□□□ -0.58
TMCC1-213ENST00000513411 ABCC9O60706 1549 aa11.4□□□□□ -0.58
TMCC1-213ENST00000513411 NACADO15069 1562 aa11.39□□□□□ -0.59
TMCC1-213ENST00000513411 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
TMCC1-213ENST00000513411 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
TMCC1-213ENST00000513411 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
TMCC1-213ENST00000513411 CECR2Q9BXF3 1484 aa11.07□□□□□ -0.64
TMCC1-213ENST00000513411 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
TMCC1-213ENST00000513411 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
TMCC1-213ENST00000513411 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
TMCC1-213ENST00000513411 WIZO95785 1651 aa11□□□□□ -0.65
TMCC1-213ENST00000513411 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
TMCC1-213ENST00000513411 HRCP23327 699 aa10.96□□□□□ -0.65
TMCC1-213ENST00000513411 UNC13AQ9UPW8 1703 aa10.94□□□□□ -0.66
TMCC1-213ENST00000513411 PCGF6Q9BYE7 350 aa10.93□□□□□ -0.66
TMCC1-213ENST00000513411 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
TMCC1-213ENST00000513411 TOP2AP11388 1531 aaKnown RBP10.92□□□□□ -0.66
TMCC1-213ENST00000513411 TRIM26Q12899 539 aaPredicted RBP10.87□□□□□ -0.67
TMCC1-213ENST00000513411 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
TMCC1-213ENST00000513411 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
TMCC1-213ENST00000513411 FAM9AQ8IZU1 332 aaPredicted RBP10.81□□□□□ -0.68
TMCC1-213ENST00000513411 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
TMCC1-213ENST00000513411 CCDC88BA6NC98 1476 aa10.81□□□□□ -0.68
TMCC1-213ENST00000513411 PEG3Q9GZU2 1588 aa10.77□□□□□ -0.69
TMCC1-213ENST00000513411 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
TMCC1-213ENST00000513411 EEA1Q15075 1411 aa10.7□□□□□ -0.7
TMCC1-213ENST00000513411 ZEB1P37275 1124 aaPredicted RBP10.69□□□□□ -0.7
TMCC1-213ENST00000513411 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
TMCC1-213ENST00000513411 ATAD2BQ9ULI0 1458 aa10.65□□□□□ -0.7
TMCC1-213ENST00000513411 BAZ1BQ9UIG0 1483 aaKnown RBP10.62□□□□□ -0.71
TMCC1-213ENST00000513411 EHMT2Q96KQ7 1210 aa10.62□□□□□ -0.71
TMCC1-213ENST00000513411 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
TMCC1-213ENST00000513411 TNIKQ9UKE5 1360 aa10.6□□□□□ -0.71
TMCC1-213ENST00000513411 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
TMCC1-213ENST00000513411 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
TMCC1-213ENST00000513411 SOGA1O94964 1423 aa10.58□□□□□ -0.72
TMCC1-213ENST00000513411 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
TMCC1-213ENST00000513411 CEP162Q5TB80 1403 aa10.55□□□□□ -0.72
TMCC1-213ENST00000513411 HMGXB3Q12766 1538 aa10.52□□□□□ -0.73
TMCC1-213ENST00000513411 SYNJ1O43426 1573 aa10.52□□□□□ -0.73
TMCC1-213ENST00000513411 CEP164Q9UPV0 1460 aa10.51□□□□□ -0.73
TMCC1-213ENST00000513411 KIF21BO75037 1637 aa10.51□□□□□ -0.73
TMCC1-213ENST00000513411 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
TMCC1-213ENST00000513411 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
TMCC1-213ENST00000513411 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
TMCC1-213ENST00000513411 TOP2BQ02880 1626 aa10.46□□□□□ -0.74
TMCC1-213ENST00000513411 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
TMCC1-213ENST00000513411 CLIP1P30622 1438 aa10.39□□□□□ -0.75
TMCC1-213ENST00000513411 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
TMCC1-213ENST00000513411 ERICH3Q5RHP9 1530 aa10.37□□□□□ -0.75
TMCC1-213ENST00000513411 CFTRP13569 1480 aa10.36□□□□□ -0.75
TMCC1-213ENST00000513411 VPS8Q8N3P4 1428 aa10.35□□□□□ -0.75
TMCC1-213ENST00000513411 PRDM2Q13029 1718 aa10.35□□□□□ -0.75
TMCC1-213ENST00000513411 RAPGEF2Q9Y4G8 1499 aa10.35□□□□□ -0.75
TMCC1-213ENST00000513411 CUX1P39880 1505 aa10.33□□□□□ -0.76
TMCC1-213ENST00000513411 APLP2Q06481 763 aa10.33□□□□□ -0.76
TMCC1-213ENST00000513411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.32□□□□□ -0.76
TMCC1-213ENST00000513411 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
TMCC1-213ENST00000513411 PRXQ9BXM0 1461 aa10.31□□□□□ -0.76
TMCC1-213ENST00000513411 TTBK1Q5TCY1 1321 aaPredicted RBP10.29□□□□□ -0.76
TMCC1-213ENST00000513411 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
TMCC1-213ENST00000513411 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
TMCC1-213ENST00000513411 ARAP1Q96P48 1450 aa10.21□□□□□ -0.78
TMCC1-213ENST00000513411 CUX2O14529 1486 aa10.18□□□□□ -0.78
TMCC1-213ENST00000513411 RANGAP1P46060 587 aaPredicted RBP10.17□□□□□ -0.78
TMCC1-213ENST00000513411 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
TMCC1-213ENST00000513411 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
TMCC1-213ENST00000513411 IGF1RP08069 1367 aa10.16□□□□□ -0.78
TMCC1-213ENST00000513411 FANCD2Q9BXW9 1451 aa10.15□□□□□ -0.78
TMCC1-213ENST00000513411 ARHGAP35Q9NRY4 1499 aa10.14□□□□□ -0.79
TMCC1-213ENST00000513411 DNMBPQ6XZF7 1577 aa10.14□□□□□ -0.79
TMCC1-213ENST00000513411 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
TMCC1-213ENST00000513411 CLSPNQ9HAW4 1339 aa10.12□□□□□ -0.79
TMCC1-213ENST00000513411 DIEXFQ68CQ4 756 aaKnown RBP10.12□□□□□ -0.79
TMCC1-213ENST00000513411 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
TMCC1-213ENST00000513411 MAP3K1Q13233 1512 aa10.11□□□□□ -0.79
TMCC1-213ENST00000513411 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
TMCC1-213ENST00000513411 ABCA10Q8WWZ4 1543 aa10.09□□□□□ -0.79
TMCC1-213ENST00000513411 LAMC3Q9Y6N6 1575 aa10.09□□□□□ -0.79
TMCC1-213ENST00000513411 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
TMCC1-213ENST00000513411 TOPBP1Q92547 1522 aa10.07□□□□□ -0.8
TMCC1-213ENST00000513411 CUL7Q14999 1698 aa10.07□□□□□ -0.8
TMCC1-213ENST00000513411 KANK4Q5T7N3 995 aaPredicted RBP10.07□□□□□ -0.8
TMCC1-213ENST00000513411 POLA1P09884 1462 aaPredicted RBP10.05□□□□□ -0.8
TMCC1-213ENST00000513411 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
TMCC1-213ENST00000513411 CCNB3Q8WWL7 1395 aa10.04□□□□□ -0.8
TMCC1-213ENST00000513411 EFCAB5A4FU69 1503 aa10.04□□□□□ -0.8
TMCC1-213ENST00000513411 CENPBP07199 599 aaPredicted RBP10.03□□□□□ -0.8
TMCC1-213ENST00000513411 RAD54L2Q9Y4B4 1467 aa10.02□□□□□ -0.81
TMCC1-213ENST00000513411 DHX57Q6P158 1386 aaKnown RBP10.01□□□□□ -0.81
TMCC1-213ENST00000513411 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
TMCC1-213ENST00000513411 NESP48681 1621 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms