RNA–Protein interactions for RNA: ENST00000372708.5

SMAP2-201, Transcript of small ArfGAP2, humanhuman

TSL 1 (best)

Gene SMAP2, Length 2,473 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAP2-201ENST00000372708 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
SMAP2-201ENST00000372708 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
SMAP2-201ENST00000372708 SHROOM4Q9ULL8 1493 aa16.53■□□□□ 0.24
SMAP2-201ENST00000372708 HRCP23327 699 aa16.45■□□□□ 0.22
SMAP2-201ENST00000372708 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
SMAP2-201ENST00000372708 ZCCHC6Q5VYS8 1495 aaKnown RBP16.36■□□□□ 0.21
SMAP2-201ENST00000372708 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
SMAP2-201ENST00000372708 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
SMAP2-201ENST00000372708 PCGF6Q9BYE7 350 aa16.08■□□□□ 0.16
SMAP2-201ENST00000372708 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
SMAP2-201ENST00000372708 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
SMAP2-201ENST00000372708 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
SMAP2-201ENST00000372708 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
SMAP2-201ENST00000372708 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
SMAP2-201ENST00000372708 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
SMAP2-201ENST00000372708 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
SMAP2-201ENST00000372708 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
SMAP2-201ENST00000372708 PELP1Q8IZL8 1130 aaKnown RBP15.65■□□□□ 0.1
SMAP2-201ENST00000372708 ABCC9O60706 1549 aa15.48■□□□□ 0.07
SMAP2-201ENST00000372708 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
SMAP2-201ENST00000372708 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
SMAP2-201ENST00000372708 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
SMAP2-201ENST00000372708 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
SMAP2-201ENST00000372708 RB1CC1Q8TDY2 1594 aa15.27■□□□□ 0.04
SMAP2-201ENST00000372708 FAM9AQ8IZU1 332 aaPredicted RBP15.13■□□□□ 0.01
SMAP2-201ENST00000372708 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
SMAP2-201ENST00000372708 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
SMAP2-201ENST00000372708 PHF23Q9BUL5 403 aaPredicted RBP15.11■□□□□ 0.01
SMAP2-201ENST00000372708 MYT1Q01538 1121 aa15.02□□□□□ -0.01
SMAP2-201ENST00000372708 NEUROD1Q13562 356 aa15.01□□□□□ -0.01
SMAP2-201ENST00000372708 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
SMAP2-201ENST00000372708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
SMAP2-201ENST00000372708 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
SMAP2-201ENST00000372708 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
SMAP2-201ENST00000372708 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
SMAP2-201ENST00000372708 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
SMAP2-201ENST00000372708 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
SMAP2-201ENST00000372708 GTF3C3Q9Y5Q9 886 aa14.89□□□□□ -0.03
SMAP2-201ENST00000372708 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
SMAP2-201ENST00000372708 NACADO15069 1562 aa14.88□□□□□ -0.03
SMAP2-201ENST00000372708 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
SMAP2-201ENST00000372708 WIZO95785 1651 aa14.84□□□□□ -0.03
SMAP2-201ENST00000372708 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
SMAP2-201ENST00000372708 TNIKQ9UKE5 1360 aa14.76□□□□□ -0.05
SMAP2-201ENST00000372708 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
SMAP2-201ENST00000372708 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
SMAP2-201ENST00000372708 EEA1Q15075 1411 aa14.71□□□□□ -0.05
SMAP2-201ENST00000372708 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
SMAP2-201ENST00000372708 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
SMAP2-201ENST00000372708 ABCC8Q09428 1581 aa14.63□□□□□ -0.07
SMAP2-201ENST00000372708 SOGA1O94964 1423 aa14.62□□□□□ -0.07
SMAP2-201ENST00000372708 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
SMAP2-201ENST00000372708 RTN4Q9NQC3 1192 aaKnown RBP14.6□□□□□ -0.07
SMAP2-201ENST00000372708 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
SMAP2-201ENST00000372708 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
SMAP2-201ENST00000372708 MIER1Q8N108 512 aa14.56□□□□□ -0.08
SMAP2-201ENST00000372708 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
SMAP2-201ENST00000372708 SMARCA4P51532 1647 aa14.53□□□□□ -0.08
SMAP2-201ENST00000372708 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
SMAP2-201ENST00000372708 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
SMAP2-201ENST00000372708 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
SMAP2-201ENST00000372708 CLSPNQ9HAW4 1339 aa14.48□□□□□ -0.09
SMAP2-201ENST00000372708 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
SMAP2-201ENST00000372708 KIF21BO75037 1637 aa14.44□□□□□ -0.1
SMAP2-201ENST00000372708 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
SMAP2-201ENST00000372708 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
SMAP2-201ENST00000372708 CLIP1P30622 1438 aa14.4□□□□□ -0.1
SMAP2-201ENST00000372708 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
SMAP2-201ENST00000372708 KCNA4P22459 653 aa14.38□□□□□ -0.11
SMAP2-201ENST00000372708 PEG3Q9GZU2 1588 aa14.31□□□□□ -0.12
SMAP2-201ENST00000372708 APLP2Q06481 763 aa14.31□□□□□ -0.12
SMAP2-201ENST00000372708 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
SMAP2-201ENST00000372708 SUPT16HQ9Y5B9 1047 aaKnown RBP14.29□□□□□ -0.12
SMAP2-201ENST00000372708 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
SMAP2-201ENST00000372708 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
SMAP2-201ENST00000372708 UNC13AQ9UPW8 1703 aa14.22□□□□□ -0.13
SMAP2-201ENST00000372708 CUX2O14529 1486 aa14.2□□□□□ -0.14
SMAP2-201ENST00000372708 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
SMAP2-201ENST00000372708 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
SMAP2-201ENST00000372708 RRBP1Q9P2E9 1410 aaKnown RBP14.17□□□□□ -0.14
SMAP2-201ENST00000372708 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
SMAP2-201ENST00000372708 ARAP1Q96P48 1450 aa14.13□□□□□ -0.15
SMAP2-201ENST00000372708 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
SMAP2-201ENST00000372708 TOP2BQ02880 1626 aa14.13□□□□□ -0.15
SMAP2-201ENST00000372708 ANP32EQ9BTT0 268 aa14.12□□□□□ -0.15
SMAP2-201ENST00000372708 BICRAQ9NZM4 1560 aa14.12□□□□□ -0.15
SMAP2-201ENST00000372708 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
SMAP2-201ENST00000372708 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.15
SMAP2-201ENST00000372708 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
SMAP2-201ENST00000372708 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
SMAP2-201ENST00000372708 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
SMAP2-201ENST00000372708 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
SMAP2-201ENST00000372708 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
SMAP2-201ENST00000372708 MAPKBP1O60336 1514 aa13.98□□□□□ -0.17
SMAP2-201ENST00000372708 MAP3K1Q13233 1512 aa13.96□□□□□ -0.17
SMAP2-201ENST00000372708 KCNH8Q96L42 1107 aa13.96□□□□□ -0.18
SMAP2-201ENST00000372708 RAB3GAP2Q9H2M9 1393 aa13.95□□□□□ -0.18
SMAP2-201ENST00000372708 TIMELESSQ9UNS1 1208 aa13.95□□□□□ -0.18
SMAP2-201ENST00000372708 KIF27Q86VH2 1401 aa13.94□□□□□ -0.18
SMAP2-201ENST00000372708 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms