RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-208ENST00000508869 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
TMCC1-208ENST00000508869 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
TMCC1-208ENST00000508869 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
TMCC1-208ENST00000508869 SENP3Q9H4L4 574 aaPredicted RBP19.42■□□□□ 0.7
TMCC1-208ENST00000508869 FOXD1Q16676 465 aa18.16■□□□□ 0.5
TMCC1-208ENST00000508869 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
TMCC1-208ENST00000508869 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
TMCC1-208ENST00000508869 ADRA2BP18089 450 aa17.35■□□□□ 0.37
TMCC1-208ENST00000508869 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
TMCC1-208ENST00000508869 MSH5O43196 834 aa16.68■□□□□ 0.26
TMCC1-208ENST00000508869 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
TMCC1-208ENST00000508869 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
TMCC1-208ENST00000508869 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
TMCC1-208ENST00000508869 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
TMCC1-208ENST00000508869 DMRT2Q9Y5R5 561 aa15.51■□□□□ 0.07
TMCC1-208ENST00000508869 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
TMCC1-208ENST00000508869 KCNA4P22459 653 aa15.33■□□□□ 0.04
TMCC1-208ENST00000508869 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
TMCC1-208ENST00000508869 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
TMCC1-208ENST00000508869 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
TMCC1-208ENST00000508869 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
TMCC1-208ENST00000508869 DCAF8L1A6NGE4 600 aa14.9□□□□□ -0.02
TMCC1-208ENST00000508869 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
TMCC1-208ENST00000508869 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
TMCC1-208ENST00000508869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.1
TMCC1-208ENST00000508869 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
TMCC1-208ENST00000508869 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
TMCC1-208ENST00000508869 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
TMCC1-208ENST00000508869 ZBTB22O15209 634 aa14.14□□□□□ -0.15
TMCC1-208ENST00000508869 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
TMCC1-208ENST00000508869 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
TMCC1-208ENST00000508869 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
TMCC1-208ENST00000508869 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
TMCC1-208ENST00000508869 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
TMCC1-208ENST00000508869 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
TMCC1-208ENST00000508869 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
TMCC1-208ENST00000508869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
TMCC1-208ENST00000508869 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
TMCC1-208ENST00000508869 CAPN15O75808 1086 aa13.79□□□□□ -0.2
TMCC1-208ENST00000508869 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
TMCC1-208ENST00000508869 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
TMCC1-208ENST00000508869 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
TMCC1-208ENST00000508869 APLP2Q06481 763 aa13.68□□□□□ -0.22
TMCC1-208ENST00000508869 DSG3P32926 999 aa13.61□□□□□ -0.23
TMCC1-208ENST00000508869 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
TMCC1-208ENST00000508869 ABCB7O75027 752 aa13.58□□□□□ -0.24
TMCC1-208ENST00000508869 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
TMCC1-208ENST00000508869 POLA2Q14181 598 aa13.45□□□□□ -0.26
TMCC1-208ENST00000508869 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
TMCC1-208ENST00000508869 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
TMCC1-208ENST00000508869 FBLN2P98095 1184 aa13□□□□□ -0.33
TMCC1-208ENST00000508869 OSCARQ8IYS5 282 aa13□□□□□ -0.33
TMCC1-208ENST00000508869 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
TMCC1-208ENST00000508869 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
TMCC1-208ENST00000508869 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
TMCC1-208ENST00000508869 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
TMCC1-208ENST00000508869 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
TMCC1-208ENST00000508869 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
TMCC1-208ENST00000508869 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
TMCC1-208ENST00000508869 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
TMCC1-208ENST00000508869 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
TMCC1-208ENST00000508869 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
TMCC1-208ENST00000508869 FKBP8Q14318 412 aa12.54□□□□□ -0.4
TMCC1-208ENST00000508869 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
TMCC1-208ENST00000508869 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
TMCC1-208ENST00000508869 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
TMCC1-208ENST00000508869 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
TMCC1-208ENST00000508869 PROM2Q8N271 834 aa12.39□□□□□ -0.43
TMCC1-208ENST00000508869 PIP4P2Q8N4L2 257 aa12.32□□□□□ -0.44
TMCC1-208ENST00000508869 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMCC1-208ENST00000508869 POTEHQ6S545 545 aa12.29□□□□□ -0.44
TMCC1-208ENST00000508869 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
TMCC1-208ENST00000508869 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
TMCC1-208ENST00000508869 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
TMCC1-208ENST00000508869 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
TMCC1-208ENST00000508869 CREBZFQ9NS37 354 aa12.13□□□□□ -0.47
TMCC1-208ENST00000508869 MIER1Q8N108 512 aa12.03□□□□□ -0.48
TMCC1-208ENST00000508869 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
TMCC1-208ENST00000508869 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
TMCC1-208ENST00000508869 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
TMCC1-208ENST00000508869 PLCD3Q8N3E9 789 aa11.96□□□□□ -0.49
TMCC1-208ENST00000508869 HAX1O00165 279 aa11.95□□□□□ -0.5
TMCC1-208ENST00000508869 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
TMCC1-208ENST00000508869 EVX2Q03828 476 aa11.94□□□□□ -0.5
TMCC1-208ENST00000508869 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
TMCC1-208ENST00000508869 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
TMCC1-208ENST00000508869 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
TMCC1-208ENST00000508869 CD44P16070 742 aaKnown RBP11.82□□□□□ -0.52
TMCC1-208ENST00000508869 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
TMCC1-208ENST00000508869 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
TMCC1-208ENST00000508869 RASEFQ8IZ41 740 aa11.76□□□□□ -0.53
TMCC1-208ENST00000508869 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
TMCC1-208ENST00000508869 NUBP1P53384 320 aa11.74□□□□□ -0.53
TMCC1-208ENST00000508869 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
TMCC1-208ENST00000508869 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
TMCC1-208ENST00000508869 SP7Q8TDD2 431 aaPredicted RBP11.72□□□□□ -0.53
TMCC1-208ENST00000508869 PAK3O75914 559 aaPredicted RBP11.66□□□□□ -0.54
TMCC1-208ENST00000508869 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
TMCC1-208ENST00000508869 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
TMCC1-208ENST00000508869 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms