Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HLA-AP01891 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-AP01891 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HLA-AP01891 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HLA-AP01891 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-AP01891 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-AP01891 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-AP01891 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-AP01891 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-AP01891 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-AP01891 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-AP01891 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-AP01891 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-AP01891 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-AP01891 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-AP01891 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-AP01891 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-AP01891 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-AP01891 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-AP01891 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-AP01891 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-AP01891 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-AP01891 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-AP01891 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-AP01891 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-AP01891 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-AP01891 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-AP01891 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.08■□□□□ 0.33
HLA-AP01891 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLA-AP01891 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-AP01891 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-AP01891 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-AP01891 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-AP01891 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.08■□□□□ 0.32
HLA-AP01891 AC010525.1-201ENST00000585559 441 ntBASIC17.08■□□□□ 0.32
HLA-AP01891 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-AP01891 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLA-AP01891 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HLA-AP01891 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.08■□□□□ 0.32
HLA-AP01891 AC011484.1-201ENST00000377652 1995 ntBASIC17.08■□□□□ 0.32
HLA-AP01891 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 AC020763.4-201ENST00000623414 4170 ntBASIC17.07■□□□□ 0.32
HLA-AP01891 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-AP01891 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-AP01891 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-AP01891 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HLA-AP01891 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-AP01891 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-AP01891 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-AP01891 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-AP01891 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-AP01891 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
HLA-AP01891 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.07■□□□□ 0.32
HLA-AP01891 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.07■□□□□ 0.32
HLA-AP01891 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-AP01891 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 MIR3181-201ENST00000578512 73 ntBASIC17.07■□□□□ 0.32
HLA-AP01891 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-AP01891 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms