Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 AL512631.2-201ENST00000604634 923 ntBASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 TREX1-205ENST00000625293 1783 ntBASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 EEF1DP3-203ENST00000566025 782 ntBASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 AC053503.5-201ENST00000601508 636 ntBASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 AL691432.2-201ENST00000607222 2038 ntBASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRDV1A0A1B0GX56 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 Z82202.1-201ENST00000623446 1880 ntBASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRDV1A0A1B0GX56 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRDV1A0A1B0GX56 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRDV1A0A1B0GX56 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms