Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 AL034346.1-201ENST00000568244 1277 ntBASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 OR7E47P-201ENST00000546390 1422 ntBASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV16A0A0A6YYK6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 OR6D1P-202ENST00000641007 5290 ntBASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 AC098818.2-201ENST00000564925 2320 ntBASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 TSPY26P-201ENST00000476365 1326 ntBASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV16A0A0A6YYK6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 MIR638-201ENST00000385237 100 ntBASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 AL136967.2-201ENST00000623968 743 ntBASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV16A0A0A6YYK6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
TRAV16A0A0A6YYK6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms