Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 AC011484.1-201ENST00000377652 1995 ntBASIC26.75■■□□□ 1.87
SPG7Q9UQ90 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SPG7Q9UQ90 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.74■■□□□ 1.87
SPG7Q9UQ90 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SPG7Q9UQ90 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 BX088651.1-201ENST00000540551 451 ntBASIC26.73■■□□□ 1.87
SPG7Q9UQ90 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SPG7Q9UQ90 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SPG7Q9UQ90 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 RARRES2P10-201ENST00000564312 460 ntBASIC26.71■■□□□ 1.87
SPG7Q9UQ90 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.71■■□□□ 1.87
SPG7Q9UQ90 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
SPG7Q9UQ90 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 PRKY-204ENST00000533551 1019 ntBASIC26.7■■□□□ 1.86
SPG7Q9UQ90 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
SPG7Q9UQ90 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.69■■□□□ 1.86
SPG7Q9UQ90 LINC01023-201ENST00000606054 436 ntBASIC26.69■■□□□ 1.86
SPG7Q9UQ90 AC113410.3-201ENST00000623366 203 ntBASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms