Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSBP3Q9BWW4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSBP3Q9BWW4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSBP3Q9BWW4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SSBP3Q9BWW4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.96■□□□□ 0.3
SSBP3Q9BWW4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.96■□□□□ 0.3
SSBP3Q9BWW4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 ABHD17AP1-201ENST00000358206 933 ntBASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 TSPY20P-201ENST00000450910 630 ntBASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 FAM201B-201ENST00000458407 597 ntBASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.95■□□□□ 0.3
SSBP3Q9BWW4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 AL356652.1-201ENST00000615962 565 ntBASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
SSBP3Q9BWW4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 FEM1AP4-201ENST00000443167 1987 ntBASIC16.93■□□□□ 0.3
SSBP3Q9BWW4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms