Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 MIR4466-201ENST00000606121 54 ntBASIC19.98■□□□□ 0.79
SPDL1Q96EA4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPDL1Q96EA4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 AC005332.8-201ENST00000622750 2735 ntBASIC19.97■□□□□ 0.79
SPDL1Q96EA4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.97■□□□□ 0.79
SPDL1Q96EA4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPDL1Q96EA4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPDL1Q96EA4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 AC027702.1-201ENST00000563810 1770 ntBASIC19.94■□□□□ 0.78
SPDL1Q96EA4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPDL1Q96EA4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms