Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 RARRES2P10-201ENST00000564312 460 ntBASIC15.92■□□□□ 0.14
LINC01006Q8NI28 MIR4785-201ENST00000585005 73 ntBASIC15.92■□□□□ 0.14
LINC01006Q8NI28 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.92■□□□□ 0.14
LINC01006Q8NI28 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 AC011484.1-201ENST00000377652 1995 ntBASIC15.91■□□□□ 0.14
LINC01006Q8NI28 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 FAM210CP-201ENST00000445714 574 ntBASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 AC113410.3-201ENST00000623366 203 ntBASIC15.91■□□□□ 0.14
LINC01006Q8NI28 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01006Q8NI28 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LINC01006Q8NI28 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 ECEL1P1-201ENST00000373592 1742 ntBASIC15.89■□□□□ 0.13
LINC01006Q8NI28 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01006Q8NI28 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms