Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.14■□□□□ 0.49
RFPL4BQ6ZWI9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.14■□□□□ 0.49
RFPL4BQ6ZWI9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFPL4BQ6ZWI9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFPL4BQ6ZWI9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFPL4BQ6ZWI9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.14■□□□□ 0.49
RFPL4BQ6ZWI9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFPL4BQ6ZWI9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 AC008175.2-201ENST00000612840 297 ntBASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 LTB4R2-202ENST00000528054 3092 ntBASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFPL4BQ6ZWI9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFPL4BQ6ZWI9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 POU5F1P4-201ENST00000413175 1085 ntBASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFPL4BQ6ZWI9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.1■□□□□ 0.49
RFPL4BQ6ZWI9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.09■□□□□ 0.49
RFPL4BQ6ZWI9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFPL4BQ6ZWI9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFPL4BQ6ZWI9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFPL4BQ6ZWI9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFPL4BQ6ZWI9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.09■□□□□ 0.49
RFPL4BQ6ZWI9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFPL4BQ6ZWI9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms