Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 AC112907.3-201ENST00000577781 2400 ntBASIC20.57■□□□□ 0.88
PACS1Q6VY07 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 AFG3L1P-217ENST00000557444 2447 ntBASIC20.56■□□□□ 0.88
PACS1Q6VY07 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PACS1Q6VY07 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PACS1Q6VY07 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS1Q6VY07 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS1Q6VY07 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.55■□□□□ 0.88
PACS1Q6VY07 AC099778.1-201ENST00000568593 1911 ntBASIC20.55■□□□□ 0.88
PACS1Q6VY07 RBM17P2-201ENST00000616397 1405 ntBASIC20.55■□□□□ 0.88
PACS1Q6VY07 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PACS1Q6VY07 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PACS1Q6VY07 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.55■□□□□ 0.88
PACS1Q6VY07 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.55■□□□□ 0.88
PACS1Q6VY07 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS1Q6VY07 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PACS1Q6VY07 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PACS1Q6VY07 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PACS1Q6VY07 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.54■□□□□ 0.88
PACS1Q6VY07 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PACS1Q6VY07 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.54■□□□□ 0.88
PACS1Q6VY07 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS1Q6VY07 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS1Q6VY07 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PACS1Q6VY07 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PACS1Q6VY07 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.54■□□□□ 0.88
PACS1Q6VY07 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PACS1Q6VY07 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PACS1Q6VY07 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PACS1Q6VY07 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PACS1Q6VY07 AC092720.2-201ENST00000602388 1665 ntBASIC20.54■□□□□ 0.88
PACS1Q6VY07 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 AC016769.1-201ENST00000409132 1010 ntBASIC20.53■□□□□ 0.88
PACS1Q6VY07 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 AC022517.1-201ENST00000592429 346 ntBASIC20.53■□□□□ 0.88
PACS1Q6VY07 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PACS1Q6VY07 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.53■□□□□ 0.88
PACS1Q6VY07 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PACS1Q6VY07 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.52■□□□□ 0.88
PACS1Q6VY07 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACS1Q6VY07 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACS1Q6VY07 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PACS1Q6VY07 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.52■□□□□ 0.88
PACS1Q6VY07 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.52■□□□□ 0.88
PACS1Q6VY07 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.52■□□□□ 0.88
PACS1Q6VY07 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.52■□□□□ 0.88
PACS1Q6VY07 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.52■□□□□ 0.88
PACS1Q6VY07 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PACS1Q6VY07 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PACS1Q6VY07 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.52■□□□□ 0.88
PACS1Q6VY07 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PACS1Q6VY07 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms