Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 AL390961.4-201ENST00000623958 2535 ntBASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 AC006128.1-201ENST00000624704 1661 ntBASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CDPF1Q6NVV7 AC124067.4-201ENST00000519691 2379 ntBASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 AC010997.5-201ENST00000609182 354 ntBASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDPF1Q6NVV7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 MIR6724-1-201ENST00000616420 92 ntBASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 MIR6724-2-201ENST00000616483 92 ntBASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 MIR6724-4-201ENST00000617390 92 ntBASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 MIR6724-3-201ENST00000622482 92 ntBASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.41■□□□□ 0.06
CDPF1Q6NVV7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDPF1Q6NVV7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms