Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.24■□□□□ 0.67
TRA2BP62995 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
TRA2BP62995 AC008694.1-202ENST00000636953 945 ntBASIC19.24■□□□□ 0.67
TRA2BP62995 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRA2BP62995 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
TRA2BP62995 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRA2BP62995 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRA2BP62995 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRA2BP62995 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.23■□□□□ 0.67
TRA2BP62995 CYP2T1P-201ENST00000432607 1285 ntBASIC19.23■□□□□ 0.67
TRA2BP62995 OR10C1-204ENST00000622521 1039 ntBASIC19.23■□□□□ 0.67
TRA2BP62995 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.23■□□□□ 0.67
TRA2BP62995 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRA2BP62995 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.23■□□□□ 0.67
TRA2BP62995 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRA2BP62995 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TRA2BP62995 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 AL512408.1-201ENST00000569378 2000 ntBASIC19.22■□□□□ 0.67
TRA2BP62995 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRA2BP62995 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
TRA2BP62995 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.22■□□□□ 0.67
TRA2BP62995 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRA2BP62995 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
TRA2BP62995 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.22■□□□□ 0.67
TRA2BP62995 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRA2BP62995 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.21■□□□□ 0.67
TRA2BP62995 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TRA2BP62995 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRA2BP62995 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRA2BP62995 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.21■□□□□ 0.67
TRA2BP62995 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRA2BP62995 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.21■□□□□ 0.67
TRA2BP62995 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.21■□□□□ 0.67
TRA2BP62995 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
TRA2BP62995 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRA2BP62995 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.21■□□□□ 0.67
TRA2BP62995 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TRA2BP62995 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TRA2BP62995 AC092437.1-201ENST00000624794 1048 ntBASIC19.21■□□□□ 0.67
TRA2BP62995 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRA2BP62995 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
TRA2BP62995 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.2■□□□□ 0.66
TRA2BP62995 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRA2BP62995 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRA2BP62995 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRA2BP62995 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.2■□□□□ 0.66
TRA2BP62995 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.2■□□□□ 0.66
TRA2BP62995 AL512625.2-201ENST00000417533 625 ntBASIC19.2■□□□□ 0.66
TRA2BP62995 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRA2BP62995 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.2■□□□□ 0.66
TRA2BP62995 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRA2BP62995 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRA2BP62995 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRA2BP62995 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
TRA2BP62995 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms