Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP1B3P54709 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
ATP1B3P54709 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP1B3P54709 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP1B3P54709 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
ATP1B3P54709 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP1B3P54709 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP1B3P54709 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP1B3P54709 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATP1B3P54709 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ATP1B3P54709 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP1B3P54709 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP1B3P54709 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.6■□□□□ 0.41
ATP1B3P54709 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP1B3P54709 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP1B3P54709 AP001160.3-201ENST00000601484 763 ntBASIC17.6■□□□□ 0.41
ATP1B3P54709 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP1B3P54709 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATP1B3P54709 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ATP1B3P54709 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP1B3P54709 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATP1B3P54709 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
ATP1B3P54709 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP1B3P54709 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP1B3P54709 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 YBX1P1-201ENST00000445822 960 ntBASIC17.59■□□□□ 0.41
ATP1B3P54709 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP1B3P54709 KRT18P20-201ENST00000548986 1279 ntBASIC17.59■□□□□ 0.41
ATP1B3P54709 TERF1P2-201ENST00000583350 1212 ntBASIC17.59■□□□□ 0.41
ATP1B3P54709 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP1B3P54709 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP1B3P54709 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP1B3P54709 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP1B3P54709 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP1B3P54709 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP1B3P54709 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP1B3P54709 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ATP1B3P54709 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.58■□□□□ 0.41
ATP1B3P54709 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP1B3P54709 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.58■□□□□ 0.41
ATP1B3P54709 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP1B3P54709 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP1B3P54709 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.58■□□□□ 0.4
ATP1B3P54709 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ATP1B3P54709 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP1B3P54709 CCDC92B-201ENST00000575506 885 ntBASIC17.58■□□□□ 0.4
ATP1B3P54709 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP1B3P54709 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
ATP1B3P54709 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP1B3P54709 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP1B3P54709 AL020996.1-203ENST00000536896 2307 ntBASIC17.58■□□□□ 0.4
ATP1B3P54709 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP1B3P54709 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP1B3P54709 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP1B3P54709 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP1B3P54709 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP1B3P54709 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP1B3P54709 SLC7A5P2-201ENST00000553010 536 ntBASIC17.57■□□□□ 0.4
ATP1B3P54709 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.57■□□□□ 0.4
ATP1B3P54709 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP1B3P54709 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP1B3P54709 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms