Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.56■■□□□ 1.04
SSR1P43307 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SSR1P43307 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 PCDHAC2-203ENST00000615316 3011 ntBASIC21.56■■□□□ 1.04
SSR1P43307 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SSR1P43307 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SSR1P43307 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.56■■□□□ 1.04
SSR1P43307 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.56■■□□□ 1.04
SSR1P43307 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SSR1P43307 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.55■■□□□ 1.04
SSR1P43307 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.55■■□□□ 1.04
SSR1P43307 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.55■■□□□ 1.04
SSR1P43307 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
SSR1P43307 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 KRT19P1-201ENST00000405746 1186 ntBASIC21.55■■□□□ 1.04
SSR1P43307 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.55■■□□□ 1.04
SSR1P43307 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.55■■□□□ 1.04
SSR1P43307 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
SSR1P43307 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.55■■□□□ 1.04
SSR1P43307 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
SSR1P43307 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSR1P43307 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SSR1P43307 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.55■■□□□ 1.04
SSR1P43307 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.54■■□□□ 1.04
SSR1P43307 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SSR1P43307 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
SSR1P43307 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SSR1P43307 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.54■■□□□ 1.04
SSR1P43307 KRT18P20-201ENST00000548986 1279 ntBASIC21.54■■□□□ 1.04
SSR1P43307 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.54■■□□□ 1.04
SSR1P43307 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.54■■□□□ 1.04
SSR1P43307 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SSR1P43307 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.54■■□□□ 1.04
SSR1P43307 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.54■■□□□ 1.04
SSR1P43307 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSR1P43307 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.53■■□□□ 1.04
SSR1P43307 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SSR1P43307 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.53■■□□□ 1.04
SSR1P43307 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SSR1P43307 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
SSR1P43307 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.53■■□□□ 1.04
SSR1P43307 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.53■■□□□ 1.04
SSR1P43307 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SSR1P43307 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SSR1P43307 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SSR1P43307 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SSR1P43307 AC020907.5-201ENST00000624372 1936 ntBASIC21.53■■□□□ 1.04
SSR1P43307 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSR1P43307 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR1P43307 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSR1P43307 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR1P43307 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.52■■□□□ 1.04
SSR1P43307 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.52■■□□□ 1.04
SSR1P43307 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SSR1P43307 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
SSR1P43307 AC116050.2-201ENST00000612102 1779 ntBASIC21.52■■□□□ 1.04
SSR1P43307 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms