Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 OR2I1P-207ENST00000453522 948 ntBASIC14.97□□□□□ -0.01
CKS2P33552 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.97□□□□□ -0.01
CKS2P33552 HSD17B1P1-201ENST00000590052 955 ntBASIC14.97□□□□□ -0.01
CKS2P33552 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CKS2P33552 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 PKD1P1-201ENST00000458669 6805 ntBASIC14.97□□□□□ -0.01
CKS2P33552 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS2P33552 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CKS2P33552 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.96□□□□□ -0.01
CKS2P33552 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CKS2P33552 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS2P33552 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CKS2P33552 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.96□□□□□ -0.02
CKS2P33552 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CKS2P33552 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CKS2P33552 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CKS2P33552 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.95□□□□□ -0.02
CKS2P33552 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CKS2P33552 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.95□□□□□ -0.02
CKS2P33552 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.95□□□□□ -0.02
CKS2P33552 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CKS2P33552 AC006455.2-201ENST00000429931 906 ntBASIC14.95□□□□□ -0.02
CKS2P33552 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CKS2P33552 KRT125P-201ENST00000546827 989 ntBASIC14.95□□□□□ -0.02
CKS2P33552 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CKS2P33552 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.95□□□□□ -0.02
CKS2P33552 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CKS2P33552 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CKS2P33552 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.94□□□□□ -0.02
CKS2P33552 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CKS2P33552 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.94□□□□□ -0.02
CKS2P33552 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CKS2P33552 AC092720.2-201ENST00000602388 1665 ntBASIC14.94□□□□□ -0.02
CKS2P33552 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CKS2P33552 AC004408.2-201ENST00000623613 2777 ntBASIC14.94□□□□□ -0.02
CKS2P33552 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 TNXA-203ENST00000507684 2038 ntBASIC14.94□□□□□ -0.02
CKS2P33552 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CKS2P33552 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.94□□□□□ -0.02
CKS2P33552 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.94□□□□□ -0.02
CKS2P33552 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CKS2P33552 AC010997.5-201ENST00000609182 354 ntBASIC14.94□□□□□ -0.02
CKS2P33552 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.94□□□□□ -0.02
CKS2P33552 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.94□□□□□ -0.02
CKS2P33552 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CKS2P33552 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CKS2P33552 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.93□□□□□ -0.02
CKS2P33552 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms