Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
BMP4P12644 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.61■□□□□ 0.57
BMP4P12644 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.61■□□□□ 0.57
BMP4P12644 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.61■□□□□ 0.57
BMP4P12644 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BMP4P12644 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
BMP4P12644 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.61■□□□□ 0.57
BMP4P12644 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP4P12644 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BMP4P12644 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP4P12644 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.6■□□□□ 0.57
BMP4P12644 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP4P12644 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP4P12644 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP4P12644 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
BMP4P12644 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BMP4P12644 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP4P12644 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP4P12644 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
BMP4P12644 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BMP4P12644 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP4P12644 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP4P12644 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BMP4P12644 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.59■□□□□ 0.57
BMP4P12644 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.59■□□□□ 0.57
BMP4P12644 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
BMP4P12644 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.59■□□□□ 0.57
BMP4P12644 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
BMP4P12644 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP4P12644 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP4P12644 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP4P12644 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP4P12644 AC020907.5-201ENST00000624372 1936 ntBASIC18.59■□□□□ 0.57
BMP4P12644 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.59■□□□□ 0.57
BMP4P12644 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BMP4P12644 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.58■□□□□ 0.57
BMP4P12644 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
BMP4P12644 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BMP4P12644 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BMP4P12644 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.58■□□□□ 0.57
BMP4P12644 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.58■□□□□ 0.57
BMP4P12644 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BMP4P12644 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
BMP4P12644 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP4P12644 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP4P12644 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.58■□□□□ 0.56
BMP4P12644 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.58■□□□□ 0.56
BMP4P12644 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
BMP4P12644 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BMP4P12644 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.58■□□□□ 0.56
BMP4P12644 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.58■□□□□ 0.56
BMP4P12644 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP4P12644 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.58■□□□□ 0.56
BMP4P12644 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
BMP4P12644 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.58■□□□□ 0.56
BMP4P12644 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BMP4P12644 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms