Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NBPF21P-201ENST00000425093 1451 ntBASIC12.85□□□□□ -0.35
APOBP04114 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC12.85□□□□□ -0.35
APOBP04114 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
APOBP04114 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
APOBP04114 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.85□□□□□ -0.35
APOBP04114 KRT18P48-201ENST00000434763 852 ntBASIC12.85□□□□□ -0.35
APOBP04114 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.85□□□□□ -0.35
APOBP04114 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.85□□□□□ -0.35
APOBP04114 AC004264.1-201ENST00000608354 794 ntBASIC12.85□□□□□ -0.35
APOBP04114 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC12.85□□□□□ -0.35
APOBP04114 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.85□□□□□ -0.35
APOBP04114 AC087388.1-201ENST00000571370 1112 ntBASIC12.85□□□□□ -0.35
APOBP04114 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.85□□□□□ -0.35
APOBP04114 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
APOBP04114 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.85□□□□□ -0.35
APOBP04114 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC12.85□□□□□ -0.35
APOBP04114 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.84□□□□□ -0.35
APOBP04114 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.84□□□□□ -0.35
APOBP04114 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 AC116562.2-201ENST00000507042 360 ntBASIC12.84□□□□□ -0.35
APOBP04114 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.84□□□□□ -0.35
APOBP04114 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
APOBP04114 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.84□□□□□ -0.35
APOBP04114 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.84□□□□□ -0.35
APOBP04114 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.84□□□□□ -0.35
APOBP04114 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
APOBP04114 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 AL355355.2-201ENST00000442321 338 ntBASIC12.84□□□□□ -0.35
APOBP04114 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.84□□□□□ -0.35
APOBP04114 WWOX-216ENST00000569818 525 ntBASIC12.84□□□□□ -0.35
APOBP04114 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC12.84□□□□□ -0.35
APOBP04114 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
APOBP04114 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
APOBP04114 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
APOBP04114 TPM4P1-201ENST00000436100 807 ntBASIC12.83□□□□□ -0.35
APOBP04114 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.83□□□□□ -0.35
APOBP04114 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.83□□□□□ -0.35
APOBP04114 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.83□□□□□ -0.35
APOBP04114 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
APOBP04114 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 MIR1238-201ENST00000408483 83 ntBASIC12.83□□□□□ -0.36
APOBP04114 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.83□□□□□ -0.36
APOBP04114 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 MESTP1-201ENST00000404287 994 ntBASIC12.83□□□□□ -0.36
APOBP04114 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.83□□□□□ -0.36
APOBP04114 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOBP04114 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC12.82□□□□□ -0.36
APOBP04114 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC12.82□□□□□ -0.36
APOBP04114 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC12.82□□□□□ -0.36
APOBP04114 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.82□□□□□ -0.36
APOBP04114 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.82□□□□□ -0.36
APOBP04114 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 AC080038.3-201ENST00000623346 1952 ntBASIC12.82□□□□□ -0.36
APOBP04114 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.82□□□□□ -0.36
APOBP04114 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.82□□□□□ -0.36
APOBP04114 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.82□□□□□ -0.36
APOBP04114 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.82□□□□□ -0.36
APOBP04114 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOBP04114 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.82□□□□□ -0.36
APOBP04114 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
APOBP04114 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOBP04114 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOBP04114 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms