Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC8.04□□□□□ -1.12
NPIPA3F8WFD2 OR4K1-202ENST00000641172 1339 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC011978.1-201ENST00000523386 1406 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 SLC16A7-214ENST00000552024 1815 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AL365217.1-201ENST00000398578 2436 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 PPP4R1L-202ENST00000334187 2746 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 MOSPD2-204ENST00000482354 1870 ntTSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 RNA5-8SP2-201ENST00000363564 152 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 LINC00272-201ENST00000367563 740 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 HCG18-234ENST00000413358 916 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC104619.1-201ENST00000459634 631 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 RPL29P25-201ENST00000465069 850 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 RN7SL659P-201ENST00000483093 299 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 RN7SL472P-201ENST00000492799 293 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 TP53TG3HP-201ENST00000563487 346 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 RN7SL118P-201ENST00000580570 302 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 snoZ6.4-201ENST00000581669 55 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 uc_338.30-201ENST00000612038 168 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC009053.4-201ENST00000614366 108 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 ALG13-226ENST00000622986 582 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC011389.3-201ENST00000623273 999 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 SH3GL3-201ENST00000324537 2012 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC098614.1-202ENST00000634895 1830 ntBASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 LINC00870-202ENST00000473713 2693 ntTSL 2 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
NPIPA3F8WFD2 AC091152.4-201ENST00000623480 3483 ntBASIC8.02□□□□□ -1.12
NPIPA3F8WFD2 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
NPIPA3F8WFD2 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC8.02□□□□□ -1.12
NPIPA3F8WFD2 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
NPIPA3F8WFD2 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC117457.1-201ENST00000614557 1391 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AL136380.2-201ENST00000411837 492 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC006460.1-201ENST00000421437 808 ntTSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC245884.3-201ENST00000445491 218 ntBASIC8.02□□□□□ -1.13
NPIPA3F8WFD2 AC103563.4-201ENST00000454384 368 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms