RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
SIMC1-201ENST00000332772 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
SIMC1-201ENST00000332772 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
SIMC1-201ENST00000332772 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
SIMC1-201ENST00000332772 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
SIMC1-201ENST00000332772 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
SIMC1-201ENST00000332772 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
SIMC1-201ENST00000332772 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
SIMC1-201ENST00000332772 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
SIMC1-201ENST00000332772 FOXD1Q16676 465 aa16.29■□□□□ 0.2
SIMC1-201ENST00000332772 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
SIMC1-201ENST00000332772 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
SIMC1-201ENST00000332772 NACADO15069 1562 aa16.17■□□□□ 0.18
SIMC1-201ENST00000332772 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
SIMC1-201ENST00000332772 ABCC9O60706 1549 aa16.08■□□□□ 0.16
SIMC1-201ENST00000332772 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
SIMC1-201ENST00000332772 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
SIMC1-201ENST00000332772 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
SIMC1-201ENST00000332772 MSH5O43196 834 aa15.61■□□□□ 0.09
SIMC1-201ENST00000332772 UNC13AQ9UPW8 1703 aa15.59■□□□□ 0.09
SIMC1-201ENST00000332772 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
SIMC1-201ENST00000332772 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
SIMC1-201ENST00000332772 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
SIMC1-201ENST00000332772 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
SIMC1-201ENST00000332772 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
SIMC1-201ENST00000332772 SMARCA4P51532 1647 aa15.33■□□□□ 0.05
SIMC1-201ENST00000332772 WIZO95785 1651 aa15.29■□□□□ 0.04
SIMC1-201ENST00000332772 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
SIMC1-201ENST00000332772 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
SIMC1-201ENST00000332772 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
SIMC1-201ENST00000332772 PIAS4Q8N2W9 510 aaPredicted RBP15.15■□□□□ 0.02
SIMC1-201ENST00000332772 SMARCA2P51531 1590 aa15.07■□□□□ 0
SIMC1-201ENST00000332772 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
SIMC1-201ENST00000332772 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
SIMC1-201ENST00000332772 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
SIMC1-201ENST00000332772 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
SIMC1-201ENST00000332772 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
SIMC1-201ENST00000332772 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
SIMC1-201ENST00000332772 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
SIMC1-201ENST00000332772 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
SIMC1-201ENST00000332772 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
SIMC1-201ENST00000332772 ADRA2BP18089 450 aa14.71□□□□□ -0.05
SIMC1-201ENST00000332772 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
SIMC1-201ENST00000332772 EEA1Q15075 1411 aa14.67□□□□□ -0.06
SIMC1-201ENST00000332772 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
SIMC1-201ENST00000332772 LOC105371045A0A1W2PR82 267 aa14.65□□□□□ -0.06
SIMC1-201ENST00000332772 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
SIMC1-201ENST00000332772 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
SIMC1-201ENST00000332772 CFTRP13569 1480 aa14.61□□□□□ -0.07
SIMC1-201ENST00000332772 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
SIMC1-201ENST00000332772 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
SIMC1-201ENST00000332772 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
SIMC1-201ENST00000332772 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.08
SIMC1-201ENST00000332772 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
SIMC1-201ENST00000332772 SOGA1O94964 1423 aa14.48□□□□□ -0.09
SIMC1-201ENST00000332772 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
SIMC1-201ENST00000332772 KIF21BO75037 1637 aa14.43□□□□□ -0.1
SIMC1-201ENST00000332772 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
SIMC1-201ENST00000332772 CUX1P39880 1505 aa14.41□□□□□ -0.1
SIMC1-201ENST00000332772 GOLGA3Q08378 1498 aa14.4□□□□□ -0.11
SIMC1-201ENST00000332772 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
SIMC1-201ENST00000332772 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
SIMC1-201ENST00000332772 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
SIMC1-201ENST00000332772 TRIM26Q12899 539 aaPredicted RBP14.31□□□□□ -0.12
SIMC1-201ENST00000332772 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
SIMC1-201ENST00000332772 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
SIMC1-201ENST00000332772 CEP162Q5TB80 1403 aa14.29□□□□□ -0.12
SIMC1-201ENST00000332772 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
SIMC1-201ENST00000332772 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
SIMC1-201ENST00000332772 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
SIMC1-201ENST00000332772 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
SIMC1-201ENST00000332772 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
SIMC1-201ENST00000332772 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
SIMC1-201ENST00000332772 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.14
SIMC1-201ENST00000332772 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.14
SIMC1-201ENST00000332772 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
SIMC1-201ENST00000332772 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
SIMC1-201ENST00000332772 NESP48681 1621 aa14.18□□□□□ -0.14
SIMC1-201ENST00000332772 ABCA10Q8WWZ4 1543 aa14.16□□□□□ -0.14
SIMC1-201ENST00000332772 CUX2O14529 1486 aa14.15□□□□□ -0.14
SIMC1-201ENST00000332772 CLIP1P30622 1438 aa14.14□□□□□ -0.15
SIMC1-201ENST00000332772 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
SIMC1-201ENST00000332772 IGF1RP08069 1367 aa14.12□□□□□ -0.15
SIMC1-201ENST00000332772 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
SIMC1-201ENST00000332772 HRCP23327 699 aa14.1□□□□□ -0.15
SIMC1-201ENST00000332772 WDR97A6NE52 1622 aa14.09□□□□□ -0.15
SIMC1-201ENST00000332772 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
SIMC1-201ENST00000332772 VPS8Q8N3P4 1428 aa14.08□□□□□ -0.16
SIMC1-201ENST00000332772 CUL7Q14999 1698 aa14.06□□□□□ -0.16
SIMC1-201ENST00000332772 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
SIMC1-201ENST00000332772 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.16
SIMC1-201ENST00000332772 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.17
SIMC1-201ENST00000332772 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
SIMC1-201ENST00000332772 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
SIMC1-201ENST00000332772 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
SIMC1-201ENST00000332772 ARAP1Q96P48 1450 aa13.97□□□□□ -0.17
SIMC1-201ENST00000332772 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
SIMC1-201ENST00000332772 WDR62O43379 1518 aa13.93□□□□□ -0.18
SIMC1-201ENST00000332772 ZEB1P37275 1124 aaPredicted RBP13.93□□□□□ -0.18
SIMC1-201ENST00000332772 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms