RNA–Protein interactions for RNA: ENST00000339284.6

SH2D4B-202, Transcript of SH2 domain containing 4B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SH2D4B, Length 3,983 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4B-202ENST00000339284 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
SH2D4B-202ENST00000339284 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
SH2D4B-202ENST00000339284 SHROOM4Q9ULL8 1493 aa15.77■□□□□ 0.12
SH2D4B-202ENST00000339284 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
SH2D4B-202ENST00000339284 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
SH2D4B-202ENST00000339284 FAM9AQ8IZU1 332 aaPredicted RBP14.58□□□□□ -0.08
SH2D4B-202ENST00000339284 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
SH2D4B-202ENST00000339284 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
SH2D4B-202ENST00000339284 PCGF6Q9BYE7 350 aa14.48□□□□□ -0.09
SH2D4B-202ENST00000339284 PELP1Q8IZL8 1130 aaKnown RBP14.47□□□□□ -0.09
SH2D4B-202ENST00000339284 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
SH2D4B-202ENST00000339284 ABCC9O60706 1549 aa14.41□□□□□ -0.1
SH2D4B-202ENST00000339284 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
SH2D4B-202ENST00000339284 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
SH2D4B-202ENST00000339284 TTBK1Q5TCY1 1321 aaPredicted RBP14.19□□□□□ -0.14
SH2D4B-202ENST00000339284 PPARGC1BQ86YN6 1023 aaKnown RBP14.15□□□□□ -0.14
SH2D4B-202ENST00000339284 HRCP23327 699 aa14.13□□□□□ -0.15
SH2D4B-202ENST00000339284 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
SH2D4B-202ENST00000339284 MYT1Q01538 1121 aa14.11□□□□□ -0.15
SH2D4B-202ENST00000339284 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
SH2D4B-202ENST00000339284 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
SH2D4B-202ENST00000339284 RANGAP1P46060 587 aaPredicted RBP14□□□□□ -0.17
SH2D4B-202ENST00000339284 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
SH2D4B-202ENST00000339284 UBTFP17480 764 aaKnown RBP13.91□□□□□ -0.18
SH2D4B-202ENST00000339284 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
SH2D4B-202ENST00000339284 DCAF1Q9Y4B6 1507 aa13.89□□□□□ -0.19
SH2D4B-202ENST00000339284 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
SH2D4B-202ENST00000339284 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
SH2D4B-202ENST00000339284 APLP2Q06481 763 aa13.73□□□□□ -0.21
SH2D4B-202ENST00000339284 ZEB1P37275 1124 aaPredicted RBP13.7□□□□□ -0.22
SH2D4B-202ENST00000339284 NACADO15069 1562 aa13.66□□□□□ -0.22
SH2D4B-202ENST00000339284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
SH2D4B-202ENST00000339284 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
SH2D4B-202ENST00000339284 RB1CC1Q8TDY2 1594 aa13.63□□□□□ -0.23
SH2D4B-202ENST00000339284 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
SH2D4B-202ENST00000339284 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
SH2D4B-202ENST00000339284 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
SH2D4B-202ENST00000339284 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
SH2D4B-202ENST00000339284 YTHDC1Q96MU7 727 aaKnown RBP13.48□□□□□ -0.25
SH2D4B-202ENST00000339284 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
SH2D4B-202ENST00000339284 WIZO95785 1651 aa13.46□□□□□ -0.25
SH2D4B-202ENST00000339284 ITGAEP38570 1179 aa13.42□□□□□ -0.26
SH2D4B-202ENST00000339284 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
SH2D4B-202ENST00000339284 GTF3C3Q9Y5Q9 886 aa13.41□□□□□ -0.26
SH2D4B-202ENST00000339284 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
SH2D4B-202ENST00000339284 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
SH2D4B-202ENST00000339284 SOGA1O94964 1423 aa13.34□□□□□ -0.27
SH2D4B-202ENST00000339284 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
SH2D4B-202ENST00000339284 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
SH2D4B-202ENST00000339284 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
SH2D4B-202ENST00000339284 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
SH2D4B-202ENST00000339284 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
SH2D4B-202ENST00000339284 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
SH2D4B-202ENST00000339284 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.29
SH2D4B-202ENST00000339284 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
SH2D4B-202ENST00000339284 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
SH2D4B-202ENST00000339284 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
SH2D4B-202ENST00000339284 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
SH2D4B-202ENST00000339284 ERICH6Q7L0X2 663 aa13.16□□□□□ -0.3
SH2D4B-202ENST00000339284 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
SH2D4B-202ENST00000339284 CLIP1P30622 1438 aa13.14□□□□□ -0.31
SH2D4B-202ENST00000339284 FAM50AQ14320 339 aaKnown RBP13.12□□□□□ -0.31
SH2D4B-202ENST00000339284 GOLGA3Q08378 1498 aa13.11□□□□□ -0.31
SH2D4B-202ENST00000339284 EEA1Q15075 1411 aa13.08□□□□□ -0.31
SH2D4B-202ENST00000339284 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
SH2D4B-202ENST00000339284 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.32
SH2D4B-202ENST00000339284 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
SH2D4B-202ENST00000339284 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
SH2D4B-202ENST00000339284 CEP164Q9UPV0 1460 aa13.02□□□□□ -0.33
SH2D4B-202ENST00000339284 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
SH2D4B-202ENST00000339284 RAPGEF2Q9Y4G8 1499 aa12.95□□□□□ -0.34
SH2D4B-202ENST00000339284 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
SH2D4B-202ENST00000339284 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
SH2D4B-202ENST00000339284 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
SH2D4B-202ENST00000339284 FBLN2P98095 1184 aa12.89□□□□□ -0.35
SH2D4B-202ENST00000339284 CUX2O14529 1486 aa12.87□□□□□ -0.35
SH2D4B-202ENST00000339284 VPS8Q8N3P4 1428 aa12.87□□□□□ -0.35
SH2D4B-202ENST00000339284 MIER1Q8N108 512 aa12.84□□□□□ -0.35
SH2D4B-202ENST00000339284 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
SH2D4B-202ENST00000339284 BCANQ96GW7 911 aa12.84□□□□□ -0.35
SH2D4B-202ENST00000339284 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
SH2D4B-202ENST00000339284 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
SH2D4B-202ENST00000339284 NEFLP07196 543 aa12.83□□□□□ -0.36
SH2D4B-202ENST00000339284 TRIM52Q96A61 297 aa12.82□□□□□ -0.36
SH2D4B-202ENST00000339284 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
SH2D4B-202ENST00000339284 HIRIP3Q9BW71 556 aaPredicted RBP12.79□□□□□ -0.36
SH2D4B-202ENST00000339284 CHIC2Q9UKJ5 165 aa12.78□□□□□ -0.36
SH2D4B-202ENST00000339284 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
SH2D4B-202ENST00000339284 EIF4G1Q04637 1599 aaKnown RBP12.76□□□□□ -0.37
SH2D4B-202ENST00000339284 POLR3GLQ9BT43 218 aa12.76□□□□□ -0.37
SH2D4B-202ENST00000339284 ANP32EQ9BTT0 268 aa12.74□□□□□ -0.37
SH2D4B-202ENST00000339284 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
SH2D4B-202ENST00000339284 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
SH2D4B-202ENST00000339284 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
SH2D4B-202ENST00000339284 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.38
SH2D4B-202ENST00000339284 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.38
SH2D4B-202ENST00000339284 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
SH2D4B-202ENST00000339284 ZNF777Q9ULD5 760 aaPredicted RBP12.69□□□□□ -0.38
SH2D4B-202ENST00000339284 DNAJC5BQ9UF47 199 aa12.69□□□□□ -0.38
SH2D4B-202ENST00000339284 IGF1RP08069 1367 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms