RNA–Protein interactions for RNA: ENST00000611708.1

AL513548.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL513548.3, Length 2,865 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL513548.3-201ENST00000611708 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
AL513548.3-201ENST00000611708 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
AL513548.3-201ENST00000611708 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
AL513548.3-201ENST00000611708 CCDC180Q9P1Z9 1646 aa16.52■□□□□ 0.24
AL513548.3-201ENST00000611708 ZCCHC6Q5VYS8 1495 aaKnown RBP16.32■□□□□ 0.2
AL513548.3-201ENST00000611708 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
AL513548.3-201ENST00000611708 ABCC9O60706 1549 aa16.04■□□□□ 0.16
AL513548.3-201ENST00000611708 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
AL513548.3-201ENST00000611708 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
AL513548.3-201ENST00000611708 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
AL513548.3-201ENST00000611708 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
AL513548.3-201ENST00000611708 NACADO15069 1562 aa15.45■□□□□ 0.06
AL513548.3-201ENST00000611708 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
AL513548.3-201ENST00000611708 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
AL513548.3-201ENST00000611708 RB1CC1Q8TDY2 1594 aa15.34■□□□□ 0.05
AL513548.3-201ENST00000611708 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.05
AL513548.3-201ENST00000611708 RSF1Q96T23 1441 aaPredicted RBP15.31■□□□□ 0.04
AL513548.3-201ENST00000611708 MROH2BQ7Z745 1585 aa15.18■□□□□ 0.02
AL513548.3-201ENST00000611708 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
AL513548.3-201ENST00000611708 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
AL513548.3-201ENST00000611708 WIZO95785 1651 aa15.08■□□□□ 0
AL513548.3-201ENST00000611708 LOC105371045A0A1W2PR82 267 aa15.07■□□□□ 0
AL513548.3-201ENST00000611708 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
AL513548.3-201ENST00000611708 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
AL513548.3-201ENST00000611708 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
AL513548.3-201ENST00000611708 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
AL513548.3-201ENST00000611708 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
AL513548.3-201ENST00000611708 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
AL513548.3-201ENST00000611708 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
AL513548.3-201ENST00000611708 ABCC8Q09428 1581 aa14.69□□□□□ -0.06
AL513548.3-201ENST00000611708 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
AL513548.3-201ENST00000611708 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
AL513548.3-201ENST00000611708 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
AL513548.3-201ENST00000611708 BAZ1BQ9UIG0 1483 aaKnown RBP14.61□□□□□ -0.07
AL513548.3-201ENST00000611708 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
AL513548.3-201ENST00000611708 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
AL513548.3-201ENST00000611708 MYT1Q01538 1121 aa14.53□□□□□ -0.08
AL513548.3-201ENST00000611708 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.08
AL513548.3-201ENST00000611708 SOGA1O94964 1423 aa14.48□□□□□ -0.09
AL513548.3-201ENST00000611708 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
AL513548.3-201ENST00000611708 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
AL513548.3-201ENST00000611708 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
AL513548.3-201ENST00000611708 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
AL513548.3-201ENST00000611708 SLC24A1O60721 1099 aa14.44□□□□□ -0.1
AL513548.3-201ENST00000611708 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
AL513548.3-201ENST00000611708 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
AL513548.3-201ENST00000611708 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
AL513548.3-201ENST00000611708 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
AL513548.3-201ENST00000611708 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
AL513548.3-201ENST00000611708 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
AL513548.3-201ENST00000611708 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
AL513548.3-201ENST00000611708 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
AL513548.3-201ENST00000611708 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
AL513548.3-201ENST00000611708 HRCP23327 699 aa14.19□□□□□ -0.14
AL513548.3-201ENST00000611708 CEP162Q5TB80 1403 aa14.17□□□□□ -0.14
AL513548.3-201ENST00000611708 CFTRP13569 1480 aa14.16□□□□□ -0.14
AL513548.3-201ENST00000611708 NESP48681 1621 aa14.16□□□□□ -0.14
AL513548.3-201ENST00000611708 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
AL513548.3-201ENST00000611708 CUX1P39880 1505 aa14.13□□□□□ -0.15
AL513548.3-201ENST00000611708 RAPGEF2Q9Y4G8 1499 aa14.11□□□□□ -0.15
AL513548.3-201ENST00000611708 EEA1Q15075 1411 aa14.09□□□□□ -0.15
AL513548.3-201ENST00000611708 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
AL513548.3-201ENST00000611708 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
AL513548.3-201ENST00000611708 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
AL513548.3-201ENST00000611708 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
AL513548.3-201ENST00000611708 PRKCSHP14314 528 aaPredicted RBP14.03□□□□□ -0.16
AL513548.3-201ENST00000611708 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.16
AL513548.3-201ENST00000611708 CLIP1P30622 1438 aa14□□□□□ -0.17
AL513548.3-201ENST00000611708 CUX2O14529 1486 aa14□□□□□ -0.17
AL513548.3-201ENST00000611708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
AL513548.3-201ENST00000611708 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
AL513548.3-201ENST00000611708 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
AL513548.3-201ENST00000611708 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
AL513548.3-201ENST00000611708 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
AL513548.3-201ENST00000611708 P3H3Q8IVL6 736 aa13.95□□□□□ -0.18
AL513548.3-201ENST00000611708 APLP2Q06481 763 aa13.95□□□□□ -0.18
AL513548.3-201ENST00000611708 KIF21BO75037 1637 aa13.92□□□□□ -0.18
AL513548.3-201ENST00000611708 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
AL513548.3-201ENST00000611708 ATP1B4Q9UN42 357 aaPredicted RBP13.9□□□□□ -0.18
AL513548.3-201ENST00000611708 IGF1RP08069 1367 aa13.9□□□□□ -0.18
AL513548.3-201ENST00000611708 PRXQ9BXM0 1461 aa13.89□□□□□ -0.19
AL513548.3-201ENST00000611708 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
AL513548.3-201ENST00000611708 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
AL513548.3-201ENST00000611708 CARMIL1Q5VZK9 1371 aa13.86□□□□□ -0.19
AL513548.3-201ENST00000611708 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
AL513548.3-201ENST00000611708 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
AL513548.3-201ENST00000611708 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
AL513548.3-201ENST00000611708 KANK4Q5T7N3 995 aaPredicted RBP13.82□□□□□ -0.2
AL513548.3-201ENST00000611708 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
AL513548.3-201ENST00000611708 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
AL513548.3-201ENST00000611708 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
AL513548.3-201ENST00000611708 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
AL513548.3-201ENST00000611708 ITGAEP38570 1179 aa13.78□□□□□ -0.2
AL513548.3-201ENST00000611708 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
AL513548.3-201ENST00000611708 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.2
AL513548.3-201ENST00000611708 KIF21AQ7Z4S6 1674 aa13.76□□□□□ -0.21
AL513548.3-201ENST00000611708 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
AL513548.3-201ENST00000611708 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
AL513548.3-201ENST00000611708 ERICH6Q7L0X2 663 aa13.72□□□□□ -0.21
AL513548.3-201ENST00000611708 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms