RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 NISCHQ9Y2I1 1504 aa15.2■□□□□ 0.02
PCDHB1-201ENST00000306549 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
PCDHB1-201ENST00000306549 FAM9AQ8IZU1 332 aaPredicted RBP13.55□□□□□ -0.24
PCDHB1-201ENST00000306549 CCDC180Q9P1Z9 1646 aa13.38□□□□□ -0.27
PCDHB1-201ENST00000306549 SUPT5HO00267 1087 aaKnown RBP13.36□□□□□ -0.27
PCDHB1-201ENST00000306549 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
PCDHB1-201ENST00000306549 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
PCDHB1-201ENST00000306549 APLP2Q06481 763 aa13.09□□□□□ -0.31
PCDHB1-201ENST00000306549 ABCC9O60706 1549 aa12.98□□□□□ -0.33
PCDHB1-201ENST00000306549 RB1CC1Q8TDY2 1594 aa12.8□□□□□ -0.36
PCDHB1-201ENST00000306549 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
PCDHB1-201ENST00000306549 NACADO15069 1562 aa12.72□□□□□ -0.37
PCDHB1-201ENST00000306549 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
PCDHB1-201ENST00000306549 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
PCDHB1-201ENST00000306549 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
PCDHB1-201ENST00000306549 ZCCHC6Q5VYS8 1495 aaKnown RBP12.56□□□□□ -0.4
PCDHB1-201ENST00000306549 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
PCDHB1-201ENST00000306549 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
PCDHB1-201ENST00000306549 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
PCDHB1-201ENST00000306549 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
PCDHB1-201ENST00000306549 DCAF1Q9Y4B6 1507 aa12.42□□□□□ -0.42
PCDHB1-201ENST00000306549 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
PCDHB1-201ENST00000306549 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
PCDHB1-201ENST00000306549 MYO15BQ96JP2 1530 aa12.29□□□□□ -0.44
PCDHB1-201ENST00000306549 NEFLP07196 543 aa12.29□□□□□ -0.44
PCDHB1-201ENST00000306549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
PCDHB1-201ENST00000306549 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
PCDHB1-201ENST00000306549 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
PCDHB1-201ENST00000306549 TTBK1Q5TCY1 1321 aaPredicted RBP12.24□□□□□ -0.45
PCDHB1-201ENST00000306549 MYT1LQ9UL68 1186 aa12.22□□□□□ -0.45
PCDHB1-201ENST00000306549 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
PCDHB1-201ENST00000306549 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
PCDHB1-201ENST00000306549 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
PCDHB1-201ENST00000306549 BAZ1BQ9UIG0 1483 aaKnown RBP12.09□□□□□ -0.47
PCDHB1-201ENST00000306549 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
PCDHB1-201ENST00000306549 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
PCDHB1-201ENST00000306549 YTHDC1Q96MU7 727 aaKnown RBP12.05□□□□□ -0.48
PCDHB1-201ENST00000306549 FBLN2P98095 1184 aa12.02□□□□□ -0.48
PCDHB1-201ENST00000306549 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
PCDHB1-201ENST00000306549 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
PCDHB1-201ENST00000306549 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.5
PCDHB1-201ENST00000306549 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
PCDHB1-201ENST00000306549 MYT1Q01538 1121 aa11.94□□□□□ -0.5
PCDHB1-201ENST00000306549 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
PCDHB1-201ENST00000306549 EEA1Q15075 1411 aa11.92□□□□□ -0.5
PCDHB1-201ENST00000306549 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
PCDHB1-201ENST00000306549 POLR3GLQ9BT43 218 aa11.89□□□□□ -0.51
PCDHB1-201ENST00000306549 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
PCDHB1-201ENST00000306549 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
PCDHB1-201ENST00000306549 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
PCDHB1-201ENST00000306549 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
PCDHB1-201ENST00000306549 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
PCDHB1-201ENST00000306549 CLSPNQ9HAW4 1339 aa11.78□□□□□ -0.52
PCDHB1-201ENST00000306549 FAM50AQ14320 339 aaKnown RBP11.77□□□□□ -0.53
PCDHB1-201ENST00000306549 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
PCDHB1-201ENST00000306549 ABCC8Q09428 1581 aa11.76□□□□□ -0.53
PCDHB1-201ENST00000306549 ITGAEP38570 1179 aa11.75□□□□□ -0.53
PCDHB1-201ENST00000306549 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
PCDHB1-201ENST00000306549 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
PCDHB1-201ENST00000306549 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
PCDHB1-201ENST00000306549 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
PCDHB1-201ENST00000306549 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
PCDHB1-201ENST00000306549 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
PCDHB1-201ENST00000306549 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
PCDHB1-201ENST00000306549 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
PCDHB1-201ENST00000306549 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
PCDHB1-201ENST00000306549 CEP164Q9UPV0 1460 aa11.61□□□□□ -0.55
PCDHB1-201ENST00000306549 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
PCDHB1-201ENST00000306549 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
PCDHB1-201ENST00000306549 NEFMP07197 916 aa11.6□□□□□ -0.55
PCDHB1-201ENST00000306549 TSPY4P0CV99 314 aa11.59□□□□□ -0.55
PCDHB1-201ENST00000306549 TSPY10P0CW01 314 aa11.59□□□□□ -0.55
PCDHB1-201ENST00000306549 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
PCDHB1-201ENST00000306549 FHAD1B1AJZ9 1412 aa11.59□□□□□ -0.55
PCDHB1-201ENST00000306549 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
PCDHB1-201ENST00000306549 BCANQ96GW7 911 aa11.58□□□□□ -0.56
PCDHB1-201ENST00000306549 WIZO95785 1651 aa11.57□□□□□ -0.56
PCDHB1-201ENST00000306549 CARMIL2Q6F5E8 1435 aa11.56□□□□□ -0.56
PCDHB1-201ENST00000306549 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
PCDHB1-201ENST00000306549 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
PCDHB1-201ENST00000306549 UNC13AQ9UPW8 1703 aa11.54□□□□□ -0.56
PCDHB1-201ENST00000306549 CLIP1P30622 1438 aa11.54□□□□□ -0.56
PCDHB1-201ENST00000306549 EIF4G1Q04637 1599 aaKnown RBP11.53□□□□□ -0.56
PCDHB1-201ENST00000306549 MROH2BQ7Z745 1585 aa11.52□□□□□ -0.57
PCDHB1-201ENST00000306549 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.57
PCDHB1-201ENST00000306549 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
PCDHB1-201ENST00000306549 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
PCDHB1-201ENST00000306549 P3H3Q8IVL6 736 aa11.52□□□□□ -0.57
PCDHB1-201ENST00000306549 ATAD2BQ9ULI0 1458 aa11.5□□□□□ -0.57
PCDHB1-201ENST00000306549 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
PCDHB1-201ENST00000306549 CUX2O14529 1486 aa11.46□□□□□ -0.58
PCDHB1-201ENST00000306549 SOGA1O94964 1423 aa11.45□□□□□ -0.58
PCDHB1-201ENST00000306549 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
PCDHB1-201ENST00000306549 CANXP27824 592 aaKnown RBP11.44□□□□□ -0.58
PCDHB1-201ENST00000306549 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
PCDHB1-201ENST00000306549 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
PCDHB1-201ENST00000306549 CC2D2AQ9P2K1 1620 aa11.41□□□□□ -0.58
PCDHB1-201ENST00000306549 FMN1Q68DA7 1419 aa11.4□□□□□ -0.58
PCDHB1-201ENST00000306549 FANCD2Q9BXW9 1451 aa11.39□□□□□ -0.59
PCDHB1-201ENST00000306549 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms