Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PRKCZ-225ENST00000503672 1213 ntTSL 1 (best)9.97□□□□□ -0.812e-7■■□□□ 13.9
PRPF8Q6P2Q9 RPL41-206ENST00000552314 595 ntTSL 27.99□□□□□ -1.134e-18■■□□□ 13.9
PRPF8Q6P2Q9 RPL41-205ENST00000546654 238 ntTSL 25.41□□□□□ -1.544e-18■■□□□ 13.9
PRPF8Q6P2Q9 OGT-208ENST00000472270 689 ntTSL 25.86□□□□□ -1.474e-15■■□□□ 13.9
PRPF8Q6P2Q9 SQSTM1-203ENST00000422245 628 ntTSL 410.02□□□□□ -0.84e-19■■□□□ 13.9
PRPF8Q6P2Q9 SHMT2-208ENST00000553868 941 ntTSL 212.52□□□□□ -0.413e-7■■□□□ 13.9
PRPF8Q6P2Q9 SHMT2-218ENST00000555213 611 ntTSL 39.03□□□□□ -0.963e-7■■□□□ 13.9
PRPF8Q6P2Q9 MAN2C1-227ENST00000565801 712 ntTSL 212.87□□□□□ -0.351e-7■■□□□ 13.9
PRPF8Q6P2Q9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.055e-7■■□□□ 13.9
PRPF8Q6P2Q9 DBN1-207ENST00000477391 1044 ntAPPRIS ALT2 TSL 314.62□□□□□ -0.075e-7■■□□□ 13.9
PRPF8Q6P2Q9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.45e-7■■□□□ 13.9
PRPF8Q6P2Q9 DBN1-206ENST00000472831 2667 ntTSL 212.49□□□□□ -0.415e-7■■□□□ 13.9
PRPF8Q6P2Q9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.785e-7■■□□□ 13.9
PRPF8Q6P2Q9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.986e-8■■□□□ 13.9
PRPF8Q6P2Q9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.096e-8■■□□□ 13.9
PRPF8Q6P2Q9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.166e-8■■□□□ 13.9
PRPF8Q6P2Q9 IST1-209ENST00000536027 823 ntTSL 32.64□□□□□ -1.999e-8■■□□□ 13.9
PRPF8Q6P2Q9 PUF60-210ENST00000527584 547 ntTSL 28.23□□□□□ -1.091e-8■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-212ENST00000505213 2343 ntTSL 57.48□□□□□ -1.211e-6■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-214ENST00000511143 816 ntTSL 36.84□□□□□ -1.311e-6■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.551e-6■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC3.62□□□□□ -1.831e-6■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.56□□□□□ -1.841e-6■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.68□□□□□ -2.141e-6■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-207ENST00000475731 444 ntTSL 51.61□□□□□ -2.151e-6■■□□□ 13.9
PRPF8Q6P2Q9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.59□□□□□ -2.151e-6■■□□□ 13.9
PRPF8Q6P2Q9 SEMA4G-206ENST00000518124 596 ntTSL 315.5■□□□□ 0.072e-7■■□□□ 13.9
PRPF8Q6P2Q9 DDX3X-211ENST00000615742 485 ntTSL 47.11□□□□□ -1.272e-11■■□□□ 13.9
PRPF8Q6P2Q9 DDX3X-222ENST00000631641 583 ntTSL 37.11□□□□□ -1.272e-11■■□□□ 13.9
PRPF8Q6P2Q9 PDXDC2P-NPIPB14P-204ENST00000530079 2764 ntTSL 510.43□□□□□ -0.742e-6■■□□□ 13.9
PRPF8Q6P2Q9 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC10.16□□□□□ -0.782e-6■■□□□ 13.9
PRPF8Q6P2Q9 TOM1-207ENST00000439512 800 ntTSL 313.91□□□□□ -0.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 TOM1-211ENST00000449508 593 ntTSL 411.84□□□□□ -0.512e-6■■□□□ 13.9
PRPF8Q6P2Q9 TOM1-218ENST00000608674 541 ntTSL 411.38□□□□□ -0.592e-6■■□□□ 13.9
PRPF8Q6P2Q9 TOM1-219ENST00000608749 553 ntTSL 411.38□□□□□ -0.592e-6■■□□□ 13.9
PRPF8Q6P2Q9 TOM1-202ENST00000395736 560 ntTSL 49.47□□□□□ -0.892e-6■■□□□ 13.9
PRPF8Q6P2Q9 FARP1-207ENST00000490389 604 ntTSL 210.22□□□□□ -0.772e-7■■□□□ 13.9
PRPF8Q6P2Q9 FARP1-208ENST00000593548 764 ntTSL 53.62□□□□□ -1.832e-7■■□□□ 13.9
PRPF8Q6P2Q9 CCDC117-206ENST00000453543 1026 ntTSL 225.59■■□□□ 1.692e-6■■□□□ 13.9
PRPF8Q6P2Q9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.72■■□□□ 1.553e-9■■□□□ 13.9
PRPF8Q6P2Q9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.01■■□□□ 1.113e-9■■□□□ 13.9
PRPF8Q6P2Q9 THRA-208ENST00000578218 907 ntTSL 421.65■■□□□ 1.062e-6■■□□□ 13.9
PRPF8Q6P2Q9 THRA-206ENST00000577486 563 ntTSL 421.39■■□□□ 1.022e-6■■□□□ 13.9
PRPF8Q6P2Q9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 13e-7■■□□□ 13.9
PRPF8Q6P2Q9 CCDC117-204ENST00000444523 463 ntTSL 421.09■□□□□ 0.972e-6■■□□□ 13.9
PRPF8Q6P2Q9 THRA-210ENST00000585047 574 ntTSL 421.08■□□□□ 0.972e-6■■□□□ 13.9
PRPF8Q6P2Q9 LRRC61-203ENST00000463441 667 ntTSL 220.99■□□□□ 0.953e-7■■□□□ 13.9
PRPF8Q6P2Q9 PIN1-211ENST00000592184 517 ntTSL 220.81■□□□□ 0.926e-12■■□□□ 13.9
PRPF8Q6P2Q9 RABGAP1-206ENST00000459903 572 ntTSL 420.19■□□□□ 0.822e-6■■□□□ 13.9
PRPF8Q6P2Q9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.79■□□□□ 0.762e-6■■□□□ 13.9
PRPF8Q6P2Q9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.733e-7■■□□□ 13.9
PRPF8Q6P2Q9 NEK9-203ENST00000553945 786 ntTSL 519.53■□□□□ 0.722e-6■■□□□ 13.9
PRPF8Q6P2Q9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.27■□□□□ 0.683e-9■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-210ENST00000574466 687 ntTSL 319.22■□□□□ 0.676e-12■■□□□ 13.9
PRPF8Q6P2Q9 TTBK2-203ENST00000564431 743 ntTSL 319.17■□□□□ 0.663e-9■■□□□ 13.9
PRPF8Q6P2Q9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.652e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.646e-12■■□□□ 13.9
PRPF8Q6P2Q9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.632e-6■■□□□ 13.9
PRPF8Q6P2Q9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.62e-6■■□□□ 13.9
PRPF8Q6P2Q9 CAPN2-208ENST00000483579 496 ntTSL 218.57■□□□□ 0.562e-6■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-206ENST00000487350 785 ntTSL 1 (best)18.3■□□□□ 0.522e-6■■□□□ 13.9
PRPF8Q6P2Q9 BCKDK-206ENST00000561755 640 ntTSL 218.29■□□□□ 0.522e-6■■□□□ 13.9
PRPF8Q6P2Q9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.522e-6■■□□□ 13.9
PRPF8Q6P2Q9 LIMK1-204ENST00000476792 785 ntTSL 218.27■□□□□ 0.512e-6■■□□□ 13.9
PRPF8Q6P2Q9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.21■□□□□ 0.513e-9■■□□□ 13.9
PRPF8Q6P2Q9 CENPN-207ENST00000564669 730 ntTSL 318.12■□□□□ 0.492e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM50A-206ENST00000498135 776 ntTSL 318.03■□□□□ 0.482e-6■■□□□ 13.9
PRPF8Q6P2Q9 MIS18BP1-202ENST00000451174 808 ntTSL 217.86■□□□□ 0.456e-12■■□□□ 13.9
PRPF8Q6P2Q9 CNOT2-206ENST00000547780 582 ntTSL 517.75■□□□□ 0.432e-6■■□□□ 13.9
PRPF8Q6P2Q9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.72■□□□□ 0.433e-9■■□□□ 13.9
PRPF8Q6P2Q9 TRIM14-204ENST00000475147 639 ntTSL 217.62■□□□□ 0.412e-6■■□□□ 13.9
PRPF8Q6P2Q9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.62■□□□□ 0.412e-6■■□□□ 13.9
PRPF8Q6P2Q9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.56■□□□□ 0.42e-6■■□□□ 13.9
PRPF8Q6P2Q9 PLXNB3-204ENST00000455214 489 ntTSL 317.38■□□□□ 0.372e-6■■□□□ 13.9
PRPF8Q6P2Q9 TPD52-215ENST00000520795 445 ntTSL 217.3■□□□□ 0.362e-6■■□□□ 13.9
PRPF8Q6P2Q9 TTBK2-204ENST00000566931 520 ntTSL 517.22■□□□□ 0.353e-9■■□□□ 13.9
PRPF8Q6P2Q9 TM9SF1-204ENST00000525592 882 ntTSL 317.2■□□□□ 0.342e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM50A-203ENST00000480937 1102 ntTSL 217.12■□□□□ 0.332e-6■■□□□ 13.9
PRPF8Q6P2Q9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.99■□□□□ 0.312e-6■■□□□ 13.9
PRPF8Q6P2Q9 TSC22D4-206ENST00000496728 837 ntTSL 316.81■□□□□ 0.282e-6■■□□□ 13.9
PRPF8Q6P2Q9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.79■□□□□ 0.282e-6■■□□□ 13.9
PRPF8Q6P2Q9 TRIM14-205ENST00000478401 814 ntTSL 216.79■□□□□ 0.282e-6■■□□□ 13.9
PRPF8Q6P2Q9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.74■□□□□ 0.272e-6■■□□□ 13.9
PRPF8Q6P2Q9 AATF-202ENST00000613840 648 ntTSL 216.73■□□□□ 0.272e-6■■□□□ 13.9
PRPF8Q6P2Q9 PPP2R5C-207ENST00000553730 1227 ntTSL 216.7■□□□□ 0.262e-6■■□□□ 13.9
PRPF8Q6P2Q9 NFS1-207ENST00000421540 563 ntTSL 516.62■□□□□ 0.253e-9■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.59■□□□□ 0.252e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-204ENST00000561470 851 ntTSL 516.51■□□□□ 0.232e-6■■□□□ 13.9
PRPF8Q6P2Q9 RFXANK-215ENST00000593273 865 ntTSL 316.47■□□□□ 0.232e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-225ENST00000489897 998 ntTSL 516.36■□□□□ 0.212e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.17■□□□□ 0.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 LPP-204ENST00000420410 535 ntTSL 316.15■□□□□ 0.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.14■□□□□ 0.182e-6■■□□□ 13.9
PRPF8Q6P2Q9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.175e-6■■□□□ 13.9
PRPF8Q6P2Q9 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 516.12■□□□□ 0.172e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.03■□□□□ 0.162e-6■■□□□ 13.9
PRPF8Q6P2Q9 GLS2-207ENST00000479952 1845 ntTSL 216.01■□□□□ 0.155e-6■■□□□ 13.9
PRPF8Q6P2Q9 CHMP2B-204ENST00000472024 836 ntTSL 515.9■□□□□ 0.142e-6■■□□□ 13.9
PRPF8Q6P2Q9 HDAC4-203ENST00000445704 445 ntTSL 315.89■□□□□ 0.133e-9■■□□□ 13.9
PRPF8Q6P2Q9 SVIL-204ENST00000460007 779 ntTSL 315.88■□□□□ 0.132e-6■■□□□ 13.9
Retrieved 100 of 73,762 protein–RNA pairs in 1180 ms