RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 AEBP2Q6ZN18 517 aaPredicted RBP28.12■■■□□ 2.09
FARP1-208ENST00000593548 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
FARP1-208ENST00000593548 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
FARP1-208ENST00000593548 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
FARP1-208ENST00000593548 FOXD1Q16676 465 aa22.2■■□□□ 1.14
FARP1-208ENST00000593548 PLPPR3Q6T4P5 718 aa22.19■■□□□ 1.14
FARP1-208ENST00000593548 ADRA2BP18089 450 aa21.29■■□□□ 1
FARP1-208ENST00000593548 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
FARP1-208ENST00000593548 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
FARP1-208ENST00000593548 MSH5O43196 834 aa20.54■□□□□ 0.88
FARP1-208ENST00000593548 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
FARP1-208ENST00000593548 PPP4R3CPQ6ZMV5 832 aa19.54■□□□□ 0.72
FARP1-208ENST00000593548 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
FARP1-208ENST00000593548 MAPK8IP2Q13387 824 aaPredicted RBP19.35■□□□□ 0.69
FARP1-208ENST00000593548 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
FARP1-208ENST00000593548 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
FARP1-208ENST00000593548 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
FARP1-208ENST00000593548 KCNA4P22459 653 aa18.96■□□□□ 0.63
FARP1-208ENST00000593548 NPM3O75607 178 aaKnown RBP18.71■□□□□ 0.59
FARP1-208ENST00000593548 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
FARP1-208ENST00000593548 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
FARP1-208ENST00000593548 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
FARP1-208ENST00000593548 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
FARP1-208ENST00000593548 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
FARP1-208ENST00000593548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.451e-29■□□□□ 8.2
FARP1-208ENST00000593548 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
FARP1-208ENST00000593548 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
FARP1-208ENST00000593548 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
FARP1-208ENST00000593548 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
FARP1-208ENST00000593548 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
FARP1-208ENST00000593548 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
FARP1-208ENST00000593548 ZBTB22O15209 634 aa17.4■□□□□ 0.38
FARP1-208ENST00000593548 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
FARP1-208ENST00000593548 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
FARP1-208ENST00000593548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
FARP1-208ENST00000593548 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
FARP1-208ENST00000593548 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
FARP1-208ENST00000593548 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
FARP1-208ENST00000593548 APLP2Q06481 763 aa17.08■□□□□ 0.32
FARP1-208ENST00000593548 CAPN15O75808 1086 aa17.05■□□□□ 0.32
FARP1-208ENST00000593548 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
FARP1-208ENST00000593548 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
FARP1-208ENST00000593548 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
FARP1-208ENST00000593548 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
FARP1-208ENST00000593548 ATXN8OSP0DMR3 200 aa16.81■□□□□ 0.28
FARP1-208ENST00000593548 ABCB7O75027 752 aa16.71■□□□□ 0.27
FARP1-208ENST00000593548 DSG3P32926 999 aa16.68■□□□□ 0.26
FARP1-208ENST00000593548 POLA2Q14181 598 aa16.58■□□□□ 0.24
FARP1-208ENST00000593548 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.2
FARP1-208ENST00000593548 FBLN2P98095 1184 aa16.2■□□□□ 0.18
FARP1-208ENST00000593548 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
FARP1-208ENST00000593548 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
FARP1-208ENST00000593548 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
FARP1-208ENST00000593548 POTEHQ6S545 545 aa15.92■□□□□ 0.14
FARP1-208ENST00000593548 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
FARP1-208ENST00000593548 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
FARP1-208ENST00000593548 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
FARP1-208ENST00000593548 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
FARP1-208ENST00000593548 SPDYE4A6NLX3 237 aa15.72■□□□□ 0.11
FARP1-208ENST00000593548 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
FARP1-208ENST00000593548 FKBP8Q14318 412 aa15.66■□□□□ 0.1
FARP1-208ENST00000593548 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
FARP1-208ENST00000593548 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
FARP1-208ENST00000593548 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
FARP1-208ENST00000593548 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
FARP1-208ENST00000593548 SPDYE1Q8NFV5 336 aaPredicted RBP15.4■□□□□ 0.06
FARP1-208ENST00000593548 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
FARP1-208ENST00000593548 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
FARP1-208ENST00000593548 PROM2Q8N271 834 aa15.3■□□□□ 0.04
FARP1-208ENST00000593548 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
FARP1-208ENST00000593548 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
FARP1-208ENST00000593548 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
FARP1-208ENST00000593548 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
FARP1-208ENST00000593548 FXR2P51116 673 aaKnown RBP eCLIP15.06■□□□□ 0
FARP1-208ENST00000593548 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
FARP1-208ENST00000593548 CHADLQ6NUI6 762 aa15.03■□□□□ -0
FARP1-208ENST00000593548 MIER1Q8N108 512 aa14.97□□□□□ -0.01
FARP1-208ENST00000593548 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
FARP1-208ENST00000593548 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
FARP1-208ENST00000593548 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
FARP1-208ENST00000593548 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
FARP1-208ENST00000593548 FARP1Q9Y4F1 1045 aaPredicted RBP14.82□□□□□ -0.04
FARP1-208ENST00000593548 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
FARP1-208ENST00000593548 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
FARP1-208ENST00000593548 ZBTB47Q9UFB7 747 aaPredicted RBP14.74□□□□□ -0.05
FARP1-208ENST00000593548 HAX1O00165 279 aa14.72□□□□□ -0.05
FARP1-208ENST00000593548 MNX1P50219 401 aaPredicted RBP14.7□□□□□ -0.06
FARP1-208ENST00000593548 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
FARP1-208ENST00000593548 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
FARP1-208ENST00000593548 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
FARP1-208ENST00000593548 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
FARP1-208ENST00000593548 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
FARP1-208ENST00000593548 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
FARP1-208ENST00000593548 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
FARP1-208ENST00000593548 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
FARP1-208ENST00000593548 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
FARP1-208ENST00000593548 NUBP1P53384 320 aa14.5□□□□□ -0.09
FARP1-208ENST00000593548 EVX2Q03828 476 aa14.5□□□□□ -0.09
FARP1-208ENST00000593548 FAM212AQ96EL1 285 aa14.47□□□□□ -0.09
FARP1-208ENST00000593548 DCAF8Q5TAQ9 597 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms