Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DDX49Q9Y6V7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.39■■□□□ 1.5
DDX49Q9Y6V7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DDX49Q9Y6V7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DDX49Q9Y6V7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DDX49Q9Y6V7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
DDX49Q9Y6V7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
DDX49Q9Y6V7 KRT18P11-201ENST00000435214 1283 ntBASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
DDX49Q9Y6V7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 AC006128.1-201ENST00000624704 1661 ntBASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
DDX49Q9Y6V7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DDX49Q9Y6V7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 MYCNOS-205ENST00000641950 531 ntBASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
DDX49Q9Y6V7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
DDX49Q9Y6V7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
DDX49Q9Y6V7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms