Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 RARRES2P10-201ENST00000564312 460 ntBASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 RN7SL850P-201ENST00000579959 291 ntBASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 AL356652.1-201ENST00000615962 565 ntBASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
KRTAP4-1Q9BYQ7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 KRT8P9-201ENST00000558927 1449 ntBASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
KRTAP4-1Q9BYQ7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 RER1-204ENST00000378518 522 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 KRT18P35-201ENST00000510488 1269 ntBASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AP003071.4-201ENST00000562276 1284 ntBASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC026471.5-201ENST00000615068 467 ntBASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP4-1Q9BYQ7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms