Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.68■□□□□ 0.9
PHOX2BQ99453 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PHOX2BQ99453 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.68■□□□□ 0.9
PHOX2BQ99453 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.68■□□□□ 0.9
PHOX2BQ99453 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 AC091076.1-201ENST00000610741 619 ntBASIC20.68■□□□□ 0.9
PHOX2BQ99453 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.68■□□□□ 0.9
PHOX2BQ99453 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 CYP2D8P-201ENST00000433633 1490 ntBASIC20.68■□□□□ 0.9
PHOX2BQ99453 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHOX2BQ99453 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PHOX2BQ99453 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHOX2BQ99453 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHOX2BQ99453 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHOX2BQ99453 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHOX2BQ99453 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 SLC25A3P1-201ENST00000443844 931 ntBASIC20.67■□□□□ 0.9
PHOX2BQ99453 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHOX2BQ99453 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHOX2BQ99453 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.67■□□□□ 0.9
PHOX2BQ99453 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHOX2BQ99453 AC061975.6-201ENST00000579045 1553 ntBASIC20.67■□□□□ 0.9
PHOX2BQ99453 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PHOX2BQ99453 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PHOX2BQ99453 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 MIR1238-201ENST00000408483 83 ntBASIC20.66■□□□□ 0.9
PHOX2BQ99453 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.66■□□□□ 0.9
PHOX2BQ99453 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PHOX2BQ99453 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
PHOX2BQ99453 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
PHOX2BQ99453 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.66■□□□□ 0.9
PHOX2BQ99453 AC006011.2-201ENST00000621313 1158 ntBASIC20.66■□□□□ 0.9
PHOX2BQ99453 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHOX2BQ99453 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHOX2BQ99453 AL117328.2-201ENST00000624617 1940 ntBASIC20.65■□□□□ 0.9
PHOX2BQ99453 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHOX2BQ99453 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.65■□□□□ 0.9
PHOX2BQ99453 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.65■□□□□ 0.9
PHOX2BQ99453 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHOX2BQ99453 AC091799.1-201ENST00000422823 811 ntBASIC20.65■□□□□ 0.9
PHOX2BQ99453 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.65■□□□□ 0.9
PHOX2BQ99453 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PHOX2BQ99453 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.65■□□□□ 0.9
PHOX2BQ99453 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PHOX2BQ99453 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHOX2BQ99453 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHOX2BQ99453 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHOX2BQ99453 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHOX2BQ99453 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHOX2BQ99453 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHOX2BQ99453 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.64■□□□□ 0.9
PHOX2BQ99453 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHOX2BQ99453 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHOX2BQ99453 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHOX2BQ99453 KRT18P22-201ENST00000402024 1347 ntBASIC20.64■□□□□ 0.89
PHOX2BQ99453 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHOX2BQ99453 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 FAM197Y1-201ENST00000421178 764 ntBASIC20.64■□□□□ 0.89
PHOX2BQ99453 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHOX2BQ99453 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHOX2BQ99453 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 AC120498.8-201ENST00000614275 531 ntBASIC20.64■□□□□ 0.89
PHOX2BQ99453 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHOX2BQ99453 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHOX2BQ99453 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHOX2BQ99453 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHOX2BQ99453 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.64■□□□□ 0.89
PHOX2BQ99453 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHOX2BQ99453 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms