Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZC3H3Q8IXZ2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 SLC25A24-204ENST00000569674 2357 ntBASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 RARRES2P4-201ENST00000514074 484 ntBASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.24■■□□□ 1.15
ZC3H3Q8IXZ2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 AC022517.1-201ENST00000592429 346 ntBASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 AL356652.1-201ENST00000615962 565 ntBASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 AC100791.3-201ENST00000617619 330 ntBASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZC3H3Q8IXZ2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZC3H3Q8IXZ2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 BID-214ENST00000617586 542 ntTSL 5 BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 AC092437.1-201ENST00000624794 1048 ntBASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZC3H3Q8IXZ2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
ZC3H3Q8IXZ2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 PGM5P4-201ENST00000421970 445 ntBASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZC3H3Q8IXZ2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms