Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC1A3P43003 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.75■□□□□ 0.59
SLC1A3P43003 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A3P43003 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLC1A3P43003 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC1A3P43003 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC1A3P43003 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC1A3P43003 AC007952.6-201ENST00000573168 2673 ntBASIC18.75■□□□□ 0.59
SLC1A3P43003 AC003957.1-201ENST00000625108 2673 ntBASIC18.75■□□□□ 0.59
SLC1A3P43003 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A3P43003 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A3P43003 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC1A3P43003 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A3P43003 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A3P43003 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 AC091799.1-201ENST00000422823 811 ntBASIC18.74■□□□□ 0.59
SLC1A3P43003 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A3P43003 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC1A3P43003 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A3P43003 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SLC1A3P43003 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A3P43003 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A3P43003 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A3P43003 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 AC007225.1-201ENST00000566331 1836 ntBASIC18.73■□□□□ 0.59
SLC1A3P43003 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC1A3P43003 AL162430.1-201ENST00000480705 870 ntBASIC18.73■□□□□ 0.59
SLC1A3P43003 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A3P43003 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC1A3P43003 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A3P43003 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A3P43003 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A3P43003 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A3P43003 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC1A3P43003 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A3P43003 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLC1A3P43003 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A3P43003 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A3P43003 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC1A3P43003 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 AL391422.3-201ENST00000603791 2761 ntBASIC18.72■□□□□ 0.59
SLC1A3P43003 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A3P43003 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A3P43003 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC1A3P43003 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC1A3P43003 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 AC016769.1-201ENST00000409132 1010 ntBASIC18.71■□□□□ 0.59
SLC1A3P43003 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 TERF1P5-201ENST00000477545 1207 ntBASIC18.71■□□□□ 0.59
SLC1A3P43003 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.71■□□□□ 0.59
SLC1A3P43003 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A3P43003 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A3P43003 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SLC1A3P43003 AC010536.3-201ENST00000620306 533 ntBASIC18.71■□□□□ 0.59
SLC1A3P43003 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC1A3P43003 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC1A3P43003 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.71■□□□□ 0.58
SLC1A3P43003 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.71■□□□□ 0.58
SLC1A3P43003 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.71■□□□□ 0.58
SLC1A3P43003 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.71■□□□□ 0.58
SLC1A3P43003 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms