Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
IFNA1P01562 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNA1P01562 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNA1P01562 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IFNA1P01562 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNA1P01562 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.16■□□□□ 0.18
IFNA1P01562 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 AC009102.2-201ENST00000606772 1639 ntBASIC16.16■□□□□ 0.18
IFNA1P01562 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.16■□□□□ 0.18
IFNA1P01562 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.16■□□□□ 0.18
IFNA1P01562 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.16■□□□□ 0.18
IFNA1P01562 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.16■□□□□ 0.18
IFNA1P01562 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
IFNA1P01562 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.16■□□□□ 0.18
IFNA1P01562 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNA1P01562 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.15■□□□□ 0.18
IFNA1P01562 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.15■□□□□ 0.18
IFNA1P01562 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
IFNA1P01562 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.15■□□□□ 0.18
IFNA1P01562 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.15■□□□□ 0.18
IFNA1P01562 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFNA1P01562 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFNA1P01562 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.15■□□□□ 0.18
IFNA1P01562 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IFNA1P01562 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFNA1P01562 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
IFNA1P01562 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
IFNA1P01562 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.14■□□□□ 0.18
IFNA1P01562 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.14■□□□□ 0.17
IFNA1P01562 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.14■□□□□ 0.17
IFNA1P01562 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.14■□□□□ 0.17
IFNA1P01562 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFNA1P01562 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.14■□□□□ 0.17
IFNA1P01562 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
IFNA1P01562 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.14■□□□□ 0.17
IFNA1P01562 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.14■□□□□ 0.17
IFNA1P01562 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.14■□□□□ 0.17
IFNA1P01562 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFNA1P01562 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms