Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H12DA2A288 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZC3H12DA2A288 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H12DA2A288 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H12DA2A288 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZC3H12DA2A288 AFG3L1P-217ENST00000557444 2447 ntBASIC18.64■□□□□ 0.58
ZC3H12DA2A288 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZC3H12DA2A288 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 AC006015.1-201ENST00000429970 570 ntBASIC18.64■□□□□ 0.57
ZC3H12DA2A288 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 MFSD11-216ENST00000590393 1141 ntBASIC18.64■□□□□ 0.57
ZC3H12DA2A288 AC022517.1-201ENST00000592429 346 ntBASIC18.64■□□□□ 0.57
ZC3H12DA2A288 AC010536.3-201ENST00000620306 533 ntBASIC18.64■□□□□ 0.57
ZC3H12DA2A288 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H12DA2A288 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 KRT18P11-201ENST00000435214 1283 ntBASIC18.63■□□□□ 0.57
ZC3H12DA2A288 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZC3H12DA2A288 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 AC011767.1-201ENST00000617410 1153 ntBASIC18.62■□□□□ 0.57
ZC3H12DA2A288 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 AC116050.2-201ENST00000612102 1779 ntBASIC18.62■□□□□ 0.57
ZC3H12DA2A288 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H12DA2A288 AC112907.3-201ENST00000577781 2400 ntBASIC18.61■□□□□ 0.57
ZC3H12DA2A288 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 AC007225.1-201ENST00000566331 1836 ntBASIC18.61■□□□□ 0.57
ZC3H12DA2A288 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 TERF1P5-201ENST00000477545 1207 ntBASIC18.61■□□□□ 0.57
ZC3H12DA2A288 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H12DA2A288 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.6■□□□□ 0.57
ZC3H12DA2A288 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms