Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 KRT17P3-201ENST00000420566 1262 ntBASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 SOX15-203ENST00000570788 1093 ntBASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRGV5A0A0B4J1U4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 AC098590.1-201ENST00000468126 897 ntBASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.35■□□□□ 0.53
TRGV5A0A0B4J1U4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 AC142381.4-202ENST00000563973 229 ntBASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 AC027702.1-201ENST00000563810 1770 ntBASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 AC121338.2-201ENST00000622535 1744 ntBASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRGV5A0A0B4J1U4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV5A0A0B4J1U4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV5A0A0B4J1U4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.33■□□□□ 0.53
TRGV5A0A0B4J1U4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV5A0A0B4J1U4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TRGV5A0A0B4J1U4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV5A0A0B4J1U4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRGV5A0A0B4J1U4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 GCSHP5-201ENST00000443090 522 ntBASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 AL158047.1-201ENST00000445918 881 ntBASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 RPS2P52-201ENST00000469610 820 ntBASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRGV5A0A0B4J1U4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRGV5A0A0B4J1U4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms