Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-7A0A0A0MS04 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRBV6-7A0A0A0MS04 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TRBV6-7A0A0A0MS04 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV6-7A0A0A0MS04 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-7A0A0A0MS04 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 AL358852.1-201ENST00000623174 1268 ntBASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV6-7A0A0A0MS04 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 TNXA-203ENST00000507684 2038 ntBASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 SUDS3P1-201ENST00000505831 966 ntBASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-7A0A0A0MS04 KRT87P-202ENST00000534226 1464 ntBASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 AC079140.4-201ENST00000507448 529 ntBASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV6-7A0A0A0MS04 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms