Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 HES6-205ENST00000409356 528 ntTSL 2 BASIC33.14■■■□□ 2.9
ARFGEF1Q9Y6D6 GPX1-201ENST00000419349 1106 ntBASIC33.12■■■□□ 2.89
ARFGEF1Q9Y6D6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
ARFGEF1Q9Y6D6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
ARFGEF1Q9Y6D6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.11■■■□□ 2.89
ARFGEF1Q9Y6D6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
ARFGEF1Q9Y6D6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ARFGEF1Q9Y6D6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
ARFGEF1Q9Y6D6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ARFGEF1Q9Y6D6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
ARFGEF1Q9Y6D6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
ARFGEF1Q9Y6D6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88
ARFGEF1Q9Y6D6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
ARFGEF1Q9Y6D6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.06■■■□□ 2.88
ARFGEF1Q9Y6D6 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.05■■■□□ 2.88
ARFGEF1Q9Y6D6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ARFGEF1Q9Y6D6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ARFGEF1Q9Y6D6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ARFGEF1Q9Y6D6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
ARFGEF1Q9Y6D6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ARFGEF1Q9Y6D6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
ARFGEF1Q9Y6D6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 AC012354.3-201ENST00000623734 483 ntBASIC33■■■□□ 2.87
ARFGEF1Q9Y6D6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
ARFGEF1Q9Y6D6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
ARFGEF1Q9Y6D6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.96■■■□□ 2.87
ARFGEF1Q9Y6D6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
ARFGEF1Q9Y6D6 NTF6A-201ENST00000591175 560 ntBASIC32.95■■■□□ 2.87
ARFGEF1Q9Y6D6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.95■■■□□ 2.86
ARFGEF1Q9Y6D6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
ARFGEF1Q9Y6D6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
ARFGEF1Q9Y6D6 RNF126P1-201ENST00000567452 1320 ntBASIC32.93■■■□□ 2.86
ARFGEF1Q9Y6D6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
ARFGEF1Q9Y6D6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.92■■■□□ 2.86
ARFGEF1Q9Y6D6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.91■■■□□ 2.86
ARFGEF1Q9Y6D6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.9■■■□□ 2.86
ARFGEF1Q9Y6D6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
ARFGEF1Q9Y6D6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.9■■■□□ 2.86
ARFGEF1Q9Y6D6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
ARFGEF1Q9Y6D6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
ARFGEF1Q9Y6D6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ARFGEF1Q9Y6D6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
ARFGEF1Q9Y6D6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
ARFGEF1Q9Y6D6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.84■■■□□ 2.85
ARFGEF1Q9Y6D6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
ARFGEF1Q9Y6D6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
ARFGEF1Q9Y6D6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
ARFGEF1Q9Y6D6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.82■■■□□ 2.84
ARFGEF1Q9Y6D6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
ARFGEF1Q9Y6D6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
ARFGEF1Q9Y6D6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
ARFGEF1Q9Y6D6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.8■■■□□ 2.84
ARFGEF1Q9Y6D6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
ARFGEF1Q9Y6D6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.76■■■□□ 2.83
ARFGEF1Q9Y6D6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.75■■■□□ 2.83
ARFGEF1Q9Y6D6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
ARFGEF1Q9Y6D6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
ARFGEF1Q9Y6D6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.71■■■□□ 2.83
ARFGEF1Q9Y6D6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.7■■■□□ 2.83
ARFGEF1Q9Y6D6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
ARFGEF1Q9Y6D6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.69■■■□□ 2.82
ARFGEF1Q9Y6D6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
ARFGEF1Q9Y6D6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
ARFGEF1Q9Y6D6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
ARFGEF1Q9Y6D6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.67■■■□□ 2.82
ARFGEF1Q9Y6D6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
ARFGEF1Q9Y6D6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
ARFGEF1Q9Y6D6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 LINC00273-201ENST00000539813 1452 ntBASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ARFGEF1Q9Y6D6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.64■■■□□ 2.82
ARFGEF1Q9Y6D6 AC008813.1-201ENST00000536597 885 ntBASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms