Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
PCDHA5Q9Y5H7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHA5Q9Y5H7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.44■■■□□ 2.3
PCDHA5Q9Y5H7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHA5Q9Y5H7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
PCDHA5Q9Y5H7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.43■■■□□ 2.3
PCDHA5Q9Y5H7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA5Q9Y5H7 AC010864.1-201ENST00000609407 1511 ntBASIC29.42■■■□□ 2.3
PCDHA5Q9Y5H7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA5Q9Y5H7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA5Q9Y5H7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
PCDHA5Q9Y5H7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA5Q9Y5H7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA5Q9Y5H7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.41■■■□□ 2.3
PCDHA5Q9Y5H7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA5Q9Y5H7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PCDHA5Q9Y5H7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
PCDHA5Q9Y5H7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
PCDHA5Q9Y5H7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
PCDHA5Q9Y5H7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDHA5Q9Y5H7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHA5Q9Y5H7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA5Q9Y5H7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.36■■■□□ 2.29
PCDHA5Q9Y5H7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.35■■■□□ 2.29
PCDHA5Q9Y5H7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.35■■■□□ 2.29
PCDHA5Q9Y5H7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA5Q9Y5H7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA5Q9Y5H7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA5Q9Y5H7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA5Q9Y5H7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.33■■■□□ 2.29
PCDHA5Q9Y5H7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA5Q9Y5H7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
PCDHA5Q9Y5H7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHA5Q9Y5H7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
PCDHA5Q9Y5H7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.31■■■□□ 2.28
PCDHA5Q9Y5H7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.31■■■□□ 2.28
PCDHA5Q9Y5H7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHA5Q9Y5H7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.3■■■□□ 2.28
PCDHA5Q9Y5H7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
PCDHA5Q9Y5H7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHA5Q9Y5H7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHA5Q9Y5H7 AC142086.6-201ENST00000621154 1765 ntBASIC29.29■■■□□ 2.28
PCDHA5Q9Y5H7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHA5Q9Y5H7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.27■■■□□ 2.28
PCDHA5Q9Y5H7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHA5Q9Y5H7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
PCDHA5Q9Y5H7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA5Q9Y5H7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA5Q9Y5H7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHA5Q9Y5H7 AL391121.1-201ENST00000607967 1349 ntBASIC29.23■■■□□ 2.27
PCDHA5Q9Y5H7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHA5Q9Y5H7 CAHM-201ENST00000604200 896 ntBASIC29.23■■■□□ 2.27
PCDHA5Q9Y5H7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHA5Q9Y5H7 DRD5P2-201ENST00000421395 2012 ntBASIC29.23■■■□□ 2.27
PCDHA5Q9Y5H7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA5Q9Y5H7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA5Q9Y5H7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA5Q9Y5H7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHA5Q9Y5H7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHA5Q9Y5H7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.21■■■□□ 2.27
PCDHA5Q9Y5H7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHA5Q9Y5H7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCDHA5Q9Y5H7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
PCDHA5Q9Y5H7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PCDHA5Q9Y5H7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.19■■■□□ 2.26
PCDHA5Q9Y5H7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCDHA5Q9Y5H7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.19■■■□□ 2.26
PCDHA5Q9Y5H7 AC136428.2-201ENST00000563187 214 ntBASIC29.19■■■□□ 2.26
PCDHA5Q9Y5H7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.18■■■□□ 2.26
PCDHA5Q9Y5H7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.18■■■□□ 2.26
PCDHA5Q9Y5H7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.17■■■□□ 2.26
PCDHA5Q9Y5H7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.17■■■□□ 2.26
PCDHA5Q9Y5H7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.17■■■□□ 2.26
PCDHA5Q9Y5H7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA5Q9Y5H7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA5Q9Y5H7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA5Q9Y5H7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA5Q9Y5H7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.16■■■□□ 2.26
PCDHA5Q9Y5H7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
PCDHA5Q9Y5H7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA5Q9Y5H7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHA5Q9Y5H7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHA5Q9Y5H7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHA5Q9Y5H7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHA5Q9Y5H7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.15■■■□□ 2.26
PCDHA5Q9Y5H7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
PCDHA5Q9Y5H7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PCDHA5Q9Y5H7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.14■■■□□ 2.26
PCDHA5Q9Y5H7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
PCDHA5Q9Y5H7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
PCDHA5Q9Y5H7 AC097358.2-201ENST00000607541 1159 ntBASIC29.13■■■□□ 2.25
PCDHA5Q9Y5H7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHA5Q9Y5H7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
PCDHA5Q9Y5H7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
PCDHA5Q9Y5H7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.11■■■□□ 2.25
PCDHA5Q9Y5H7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHA5Q9Y5H7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHA5Q9Y5H7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHA5Q9Y5H7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.1■■■□□ 2.25
PCDHA5Q9Y5H7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.1■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms