Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.39■■□□□ 1.66
PCDHGA11Q9Y5H2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHGA11Q9Y5H2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PCDHGA11Q9Y5H2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
PCDHGA11Q9Y5H2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
PCDHGA11Q9Y5H2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHGA11Q9Y5H2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA11Q9Y5H2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA11Q9Y5H2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA11Q9Y5H2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
PCDHGA11Q9Y5H2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA11Q9Y5H2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PCDHGA11Q9Y5H2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHGA11Q9Y5H2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDHGA11Q9Y5H2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHGA11Q9Y5H2 AC010864.1-201ENST00000609407 1511 ntBASIC25.34■■□□□ 1.65
PCDHGA11Q9Y5H2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
PCDHGA11Q9Y5H2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA11Q9Y5H2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA11Q9Y5H2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA11Q9Y5H2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA11Q9Y5H2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PCDHGA11Q9Y5H2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHGA11Q9Y5H2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.28■■□□□ 1.64
PCDHGA11Q9Y5H2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHGA11Q9Y5H2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHGA11Q9Y5H2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PCDHGA11Q9Y5H2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGA11Q9Y5H2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGA11Q9Y5H2 SUZ12P1-203ENST00000578195 985 ntBASIC25.27■■□□□ 1.64
PCDHGA11Q9Y5H2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGA11Q9Y5H2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA11Q9Y5H2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA11Q9Y5H2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA11Q9Y5H2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
PCDHGA11Q9Y5H2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA11Q9Y5H2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA11Q9Y5H2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA11Q9Y5H2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA11Q9Y5H2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA11Q9Y5H2 MIR762-201ENST00000390236 83 ntBASIC25.24■■□□□ 1.63
PCDHGA11Q9Y5H2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA11Q9Y5H2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA11Q9Y5H2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHGA11Q9Y5H2 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDHGA11Q9Y5H2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA11Q9Y5H2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA11Q9Y5H2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGA11Q9Y5H2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PCDHGA11Q9Y5H2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGA11Q9Y5H2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
PCDHGA11Q9Y5H2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGA11Q9Y5H2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA11Q9Y5H2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHGA11Q9Y5H2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA11Q9Y5H2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHGA11Q9Y5H2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA11Q9Y5H2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGA11Q9Y5H2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA11Q9Y5H2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA11Q9Y5H2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA11Q9Y5H2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA11Q9Y5H2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHGA11Q9Y5H2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGA11Q9Y5H2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGA11Q9Y5H2 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.16■■□□□ 1.62
PCDHGA11Q9Y5H2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGA11Q9Y5H2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA11Q9Y5H2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.15■■□□□ 1.62
PCDHGA11Q9Y5H2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA11Q9Y5H2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA11Q9Y5H2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA11Q9Y5H2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA11Q9Y5H2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
PCDHGA11Q9Y5H2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.14■■□□□ 1.62
PCDHGA11Q9Y5H2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA11Q9Y5H2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA11Q9Y5H2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA11Q9Y5H2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHGA11Q9Y5H2 AL139393.2-201ENST00000608721 2025 ntBASIC25.12■■□□□ 1.61
PCDHGA11Q9Y5H2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDHGA11Q9Y5H2 AC005559.1-201ENST00000589661 871 ntBASIC25.11■■□□□ 1.61
PCDHGA11Q9Y5H2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA11Q9Y5H2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA11Q9Y5H2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA11Q9Y5H2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA11Q9Y5H2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGA11Q9Y5H2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDHGA11Q9Y5H2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGA11Q9Y5H2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHGA11Q9Y5H2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGA11Q9Y5H2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.07■■□□□ 1.6
PCDHGA11Q9Y5H2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGA11Q9Y5H2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PCDHGA11Q9Y5H2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGA11Q9Y5H2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHGA11Q9Y5H2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDHGA11Q9Y5H2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGA11Q9Y5H2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGA11Q9Y5H2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms