Protein–RNA interactions for Protein: Q9H306

MMP27, Matrix metalloproteinase-27, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP27Q9H306 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.47■■□□□ 1.35
MMP27Q9H306 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MMP27Q9H306 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MMP27Q9H306 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
MMP27Q9H306 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MMP27Q9H306 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.45■■□□□ 1.35
MMP27Q9H306 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
MMP27Q9H306 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MMP27Q9H306 DRD5P2-201ENST00000421395 2012 ntBASIC23.45■■□□□ 1.34
MMP27Q9H306 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.44■■□□□ 1.34
MMP27Q9H306 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.44■■□□□ 1.34
MMP27Q9H306 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MMP27Q9H306 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MMP27Q9H306 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MMP27Q9H306 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MMP27Q9H306 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
MMP27Q9H306 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
MMP27Q9H306 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
MMP27Q9H306 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MMP27Q9H306 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MMP27Q9H306 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MMP27Q9H306 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
MMP27Q9H306 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
MMP27Q9H306 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
MMP27Q9H306 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MMP27Q9H306 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.4■■□□□ 1.34
MMP27Q9H306 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MMP27Q9H306 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
MMP27Q9H306 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MMP27Q9H306 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MMP27Q9H306 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MMP27Q9H306 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MMP27Q9H306 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
MMP27Q9H306 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.38■■□□□ 1.33
MMP27Q9H306 AL135925.1-201ENST00000605920 1701 ntBASIC23.38■■□□□ 1.33
MMP27Q9H306 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MMP27Q9H306 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.37■■□□□ 1.33
MMP27Q9H306 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MMP27Q9H306 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
MMP27Q9H306 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP27Q9H306 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MMP27Q9H306 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.33■■□□□ 1.33
MMP27Q9H306 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP27Q9H306 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.32■■□□□ 1.32
MMP27Q9H306 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MMP27Q9H306 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MMP27Q9H306 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MMP27Q9H306 AL139393.2-201ENST00000608721 2025 ntBASIC23.31■■□□□ 1.32
MMP27Q9H306 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.31■■□□□ 1.32
MMP27Q9H306 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MMP27Q9H306 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.3■■□□□ 1.32
MMP27Q9H306 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.3■■□□□ 1.32
MMP27Q9H306 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
MMP27Q9H306 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MMP27Q9H306 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MMP27Q9H306 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MMP27Q9H306 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.29■■□□□ 1.32
MMP27Q9H306 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
MMP27Q9H306 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MMP27Q9H306 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
MMP27Q9H306 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP27Q9H306 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP27Q9H306 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP27Q9H306 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MMP27Q9H306 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.24■■□□□ 1.31
MMP27Q9H306 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP27Q9H306 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP27Q9H306 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP27Q9H306 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.24■■□□□ 1.31
MMP27Q9H306 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP27Q9H306 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
MMP27Q9H306 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
MMP27Q9H306 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
MMP27Q9H306 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP27Q9H306 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
MMP27Q9H306 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP27Q9H306 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP27Q9H306 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MMP27Q9H306 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MMP27Q9H306 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP27Q9H306 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
MMP27Q9H306 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.2■■□□□ 1.3
MMP27Q9H306 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.2■■□□□ 1.3
MMP27Q9H306 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP27Q9H306 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
MMP27Q9H306 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.19■■□□□ 1.3
MMP27Q9H306 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
MMP27Q9H306 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
MMP27Q9H306 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
MMP27Q9H306 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.17■■□□□ 1.3
MMP27Q9H306 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MMP27Q9H306 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
MMP27Q9H306 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MMP27Q9H306 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP27Q9H306 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
MMP27Q9H306 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MMP27Q9H306 AL449106.1-201ENST00000608517 1980 ntBASIC23.15■■□□□ 1.3
MMP27Q9H306 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
MMP27Q9H306 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MMP27Q9H306 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms