Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.77■■■□□ 2.2
CDH23Q9H251 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDH23Q9H251 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.77■■■□□ 2.2
CDH23Q9H251 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.77■■■□□ 2.2
CDH23Q9H251 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CDH23Q9H251 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CDH23Q9H251 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDH23Q9H251 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
CDH23Q9H251 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.76■■■□□ 2.19
CDH23Q9H251 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
CDH23Q9H251 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDH23Q9H251 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
CDH23Q9H251 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDH23Q9H251 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDH23Q9H251 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
CDH23Q9H251 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
CDH23Q9H251 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
CDH23Q9H251 NTF6A-201ENST00000591175 560 ntBASIC28.74■■■□□ 2.19
CDH23Q9H251 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CDH23Q9H251 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.73■■■□□ 2.19
CDH23Q9H251 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
CDH23Q9H251 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CDH23Q9H251 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.71■■■□□ 2.19
CDH23Q9H251 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CDH23Q9H251 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.68■■■□□ 2.18
CDH23Q9H251 AC018358.1-201ENST00000631079 1402 ntBASIC28.68■■■□□ 2.18
CDH23Q9H251 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.68■■■□□ 2.18
CDH23Q9H251 AC012354.3-201ENST00000623734 483 ntBASIC28.67■■■□□ 2.18
CDH23Q9H251 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDH23Q9H251 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CDH23Q9H251 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDH23Q9H251 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CDH23Q9H251 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
CDH23Q9H251 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.62■■■□□ 2.17
CDH23Q9H251 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CDH23Q9H251 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.59■■■□□ 2.17
CDH23Q9H251 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CDH23Q9H251 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CDH23Q9H251 AC008813.1-201ENST00000536597 885 ntBASIC28.59■■■□□ 2.17
CDH23Q9H251 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
CDH23Q9H251 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.57■■■□□ 2.16
CDH23Q9H251 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
CDH23Q9H251 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.54■■■□□ 2.16
CDH23Q9H251 AL033527.3-201ENST00000566366 1196 ntBASIC28.54■■■□□ 2.16
CDH23Q9H251 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDH23Q9H251 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.52■■■□□ 2.16
CDH23Q9H251 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.52■■■□□ 2.16
CDH23Q9H251 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDH23Q9H251 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
CDH23Q9H251 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
CDH23Q9H251 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
CDH23Q9H251 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CDH23Q9H251 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDH23Q9H251 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CDH23Q9H251 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CDH23Q9H251 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CDH23Q9H251 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CDH23Q9H251 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.47■■■□□ 2.15
CDH23Q9H251 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CDH23Q9H251 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.47■■■□□ 2.15
CDH23Q9H251 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.47■■■□□ 2.15
CDH23Q9H251 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
CDH23Q9H251 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CDH23Q9H251 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.46■■■□□ 2.15
CDH23Q9H251 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.45■■■□□ 2.15
CDH23Q9H251 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CDH23Q9H251 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.45■■■□□ 2.15
CDH23Q9H251 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.45■■■□□ 2.14
CDH23Q9H251 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.45■■■□□ 2.14
CDH23Q9H251 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.45■■■□□ 2.14
CDH23Q9H251 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CDH23Q9H251 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CDH23Q9H251 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.44■■■□□ 2.14
CDH23Q9H251 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
CDH23Q9H251 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.43■■■□□ 2.14
CDH23Q9H251 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.43■■■□□ 2.14
CDH23Q9H251 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDH23Q9H251 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CDH23Q9H251 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDH23Q9H251 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDH23Q9H251 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDH23Q9H251 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDH23Q9H251 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDH23Q9H251 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDH23Q9H251 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDH23Q9H251 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.39■■■□□ 2.14
CDH23Q9H251 TSPY13P-201ENST00000338964 914 ntBASIC28.38■■■□□ 2.13
CDH23Q9H251 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.38■■■□□ 2.13
CDH23Q9H251 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDH23Q9H251 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDH23Q9H251 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDH23Q9H251 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.36■■■□□ 2.13
CDH23Q9H251 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms