Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RTL8AQ9BWD3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL8AQ9BWD3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.41■■□□□ 1.18
RTL8AQ9BWD3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTL8AQ9BWD3 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.41■■□□□ 1.18
RTL8AQ9BWD3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTL8AQ9BWD3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTL8AQ9BWD3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTL8AQ9BWD3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
RTL8AQ9BWD3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RTL8AQ9BWD3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTL8AQ9BWD3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.39■■□□□ 1.17
RTL8AQ9BWD3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.38■■□□□ 1.17
RTL8AQ9BWD3 ABCB10P3-201ENST00000561950 2166 ntBASIC22.38■■□□□ 1.17
RTL8AQ9BWD3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.38■■□□□ 1.17
RTL8AQ9BWD3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTL8AQ9BWD3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTL8AQ9BWD3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL8AQ9BWD3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RTL8AQ9BWD3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTL8AQ9BWD3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTL8AQ9BWD3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTL8AQ9BWD3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL8AQ9BWD3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL8AQ9BWD3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL8AQ9BWD3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RTL8AQ9BWD3 AC005559.1-201ENST00000589661 871 ntBASIC22.36■■□□□ 1.17
RTL8AQ9BWD3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RTL8AQ9BWD3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.35■■□□□ 1.17
RTL8AQ9BWD3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.34■■□□□ 1.17
RTL8AQ9BWD3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RTL8AQ9BWD3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL8AQ9BWD3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL8AQ9BWD3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL8AQ9BWD3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RTL8AQ9BWD3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL8AQ9BWD3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RTL8AQ9BWD3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RTL8AQ9BWD3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
RTL8AQ9BWD3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RTL8AQ9BWD3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RTL8AQ9BWD3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL8AQ9BWD3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL8AQ9BWD3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTL8AQ9BWD3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL8AQ9BWD3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTL8AQ9BWD3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RTL8AQ9BWD3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTL8AQ9BWD3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.3■■□□□ 1.16
RTL8AQ9BWD3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTL8AQ9BWD3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.3■■□□□ 1.16
RTL8AQ9BWD3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTL8AQ9BWD3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RTL8AQ9BWD3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
RTL8AQ9BWD3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL8AQ9BWD3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTL8AQ9BWD3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTL8AQ9BWD3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTL8AQ9BWD3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.27■■□□□ 1.16
RTL8AQ9BWD3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RTL8AQ9BWD3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
RTL8AQ9BWD3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTL8AQ9BWD3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTL8AQ9BWD3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
RTL8AQ9BWD3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTL8AQ9BWD3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTL8AQ9BWD3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTL8AQ9BWD3 MIR3665-201ENST00000578708 105 ntBASIC22.25■■□□□ 1.15
RTL8AQ9BWD3 AP006261.1-201ENST00000584783 668 ntBASIC22.25■■□□□ 1.15
RTL8AQ9BWD3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.25■■□□□ 1.15
RTL8AQ9BWD3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
RTL8AQ9BWD3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.24■■□□□ 1.15
RTL8AQ9BWD3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
RTL8AQ9BWD3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTL8AQ9BWD3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL8AQ9BWD3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTL8AQ9BWD3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL8AQ9BWD3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RTL8AQ9BWD3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL8AQ9BWD3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.23■■□□□ 1.15
RTL8AQ9BWD3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTL8AQ9BWD3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.22■■□□□ 1.15
RTL8AQ9BWD3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.22■■□□□ 1.15
RTL8AQ9BWD3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.22■■□□□ 1.15
RTL8AQ9BWD3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTL8AQ9BWD3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.22■■□□□ 1.15
RTL8AQ9BWD3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL8AQ9BWD3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.21■■□□□ 1.15
RTL8AQ9BWD3 DUX4L28-201ENST00000623687 678 ntBASIC22.21■■□□□ 1.15
RTL8AQ9BWD3 AC139426.1-201ENST00000568218 2529 ntBASIC22.21■■□□□ 1.15
RTL8AQ9BWD3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL8AQ9BWD3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTL8AQ9BWD3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RTL8AQ9BWD3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.19■■□□□ 1.14
RTL8AQ9BWD3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL8AQ9BWD3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RTL8AQ9BWD3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL8AQ9BWD3 AL139393.2-201ENST00000608721 2025 ntBASIC22.18■■□□□ 1.14
RTL8AQ9BWD3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL8AQ9BWD3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms