Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.56■■□□□ 1.2
FOXC2Q99958 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.55■■□□□ 1.2
FOXC2Q99958 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.55■■□□□ 1.2
FOXC2Q99958 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXC2Q99958 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
FOXC2Q99958 RNF126P1-201ENST00000567452 1320 ntBASIC22.53■■□□□ 1.2
FOXC2Q99958 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.52■■□□□ 1.2
FOXC2Q99958 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.52■■□□□ 1.2
FOXC2Q99958 GPX1-201ENST00000419349 1106 ntBASIC22.52■■□□□ 1.2
FOXC2Q99958 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.52■■□□□ 1.2
FOXC2Q99958 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
FOXC2Q99958 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
FOXC2Q99958 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXC2Q99958 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
FOXC2Q99958 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.45■■□□□ 1.18
FOXC2Q99958 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXC2Q99958 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXC2Q99958 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXC2Q99958 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXC2Q99958 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXC2Q99958 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXC2Q99958 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.44■■□□□ 1.18
FOXC2Q99958 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.43■■□□□ 1.18
FOXC2Q99958 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXC2Q99958 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXC2Q99958 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXC2Q99958 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXC2Q99958 AC012354.3-201ENST00000623734 483 ntBASIC22.42■■□□□ 1.18
FOXC2Q99958 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXC2Q99958 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXC2Q99958 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
FOXC2Q99958 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
FOXC2Q99958 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
FOXC2Q99958 NTF6A-201ENST00000591175 560 ntBASIC22.4■■□□□ 1.18
FOXC2Q99958 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
FOXC2Q99958 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
FOXC2Q99958 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXC2Q99958 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.38■■□□□ 1.17
FOXC2Q99958 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FOXC2Q99958 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
FOXC2Q99958 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
FOXC2Q99958 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
FOXC2Q99958 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FOXC2Q99958 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
FOXC2Q99958 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.36■■□□□ 1.17
FOXC2Q99958 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
FOXC2Q99958 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.35■■□□□ 1.17
FOXC2Q99958 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
FOXC2Q99958 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXC2Q99958 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXC2Q99958 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
FOXC2Q99958 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
FOXC2Q99958 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXC2Q99958 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.33■■□□□ 1.17
FOXC2Q99958 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXC2Q99958 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
FOXC2Q99958 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
FOXC2Q99958 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXC2Q99958 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
FOXC2Q99958 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.31■■□□□ 1.16
FOXC2Q99958 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FOXC2Q99958 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
FOXC2Q99958 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.3■■□□□ 1.16
FOXC2Q99958 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXC2Q99958 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.3■■□□□ 1.16
FOXC2Q99958 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
FOXC2Q99958 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXC2Q99958 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
FOXC2Q99958 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.28■■□□□ 1.16
FOXC2Q99958 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FOXC2Q99958 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXC2Q99958 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
FOXC2Q99958 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXC2Q99958 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXC2Q99958 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXC2Q99958 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXC2Q99958 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FOXC2Q99958 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FOXC2Q99958 AC022413.1-201ENST00000624602 984 ntBASIC22.24■■□□□ 1.15
FOXC2Q99958 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXC2Q99958 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.23■■□□□ 1.15
FOXC2Q99958 AC018358.1-201ENST00000631079 1402 ntBASIC22.23■■□□□ 1.15
FOXC2Q99958 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FOXC2Q99958 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.22■■□□□ 1.15
FOXC2Q99958 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
FOXC2Q99958 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FOXC2Q99958 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.22■■□□□ 1.15
FOXC2Q99958 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.22■■□□□ 1.15
FOXC2Q99958 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
FOXC2Q99958 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXC2Q99958 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.21■■□□□ 1.15
FOXC2Q99958 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXC2Q99958 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXC2Q99958 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.2■■□□□ 1.14
FOXC2Q99958 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXC2Q99958 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXC2Q99958 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
FOXC2Q99958 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXC2Q99958 AL033527.3-201ENST00000566366 1196 ntBASIC22.18■■□□□ 1.14
FOXC2Q99958 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms