Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
SHKBP1Q8TBC3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SHKBP1Q8TBC3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.76■■■□□ 2.04
SHKBP1Q8TBC3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
SHKBP1Q8TBC3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHKBP1Q8TBC3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.76■■■□□ 2.03
SHKBP1Q8TBC3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SHKBP1Q8TBC3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SHKBP1Q8TBC3 MIR639-201ENST00000384974 98 ntBASIC27.71■■■□□ 2.03
SHKBP1Q8TBC3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.71■■■□□ 2.03
SHKBP1Q8TBC3 LINC01971-201ENST00000617888 1048 ntBASIC27.71■■■□□ 2.03
SHKBP1Q8TBC3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SHKBP1Q8TBC3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
SHKBP1Q8TBC3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
SHKBP1Q8TBC3 MIR3648-2-201ENST00000581792 180 ntBASIC27.7■■■□□ 2.02
SHKBP1Q8TBC3 DUX4L11-201ENST00000611504 1267 ntBASIC27.7■■■□□ 2.02
SHKBP1Q8TBC3 DUX4L12-201ENST00000614593 1267 ntBASIC27.7■■■□□ 2.02
SHKBP1Q8TBC3 MIR3648-1-201ENST00000615959 180 ntBASIC27.7■■■□□ 2.02
SHKBP1Q8TBC3 DUX4L14-201ENST00000621227 1267 ntBASIC27.7■■■□□ 2.02
SHKBP1Q8TBC3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SHKBP1Q8TBC3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
SHKBP1Q8TBC3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHKBP1Q8TBC3 MIR4449-201ENST00000578365 66 ntBASIC27.69■■■□□ 2.02
SHKBP1Q8TBC3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHKBP1Q8TBC3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHKBP1Q8TBC3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
SHKBP1Q8TBC3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
SHKBP1Q8TBC3 AC016575.1-201ENST00000607026 382 ntBASIC27.68■■■□□ 2.02
SHKBP1Q8TBC3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.68■■■□□ 2.02
SHKBP1Q8TBC3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SHKBP1Q8TBC3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
SHKBP1Q8TBC3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.67■■■□□ 2.02
SHKBP1Q8TBC3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.67■■■□□ 2.02
SHKBP1Q8TBC3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SHKBP1Q8TBC3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SHKBP1Q8TBC3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SHKBP1Q8TBC3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SHKBP1Q8TBC3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SHKBP1Q8TBC3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SHKBP1Q8TBC3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SHKBP1Q8TBC3 CR559946.2-201ENST00000623684 991 ntBASIC27.64■■■□□ 2.02
SHKBP1Q8TBC3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SHKBP1Q8TBC3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SHKBP1Q8TBC3 AL161658.1-201ENST00000623641 1967 ntBASIC27.62■■■□□ 2.01
SHKBP1Q8TBC3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.62■■■□□ 2.01
SHKBP1Q8TBC3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SHKBP1Q8TBC3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
SHKBP1Q8TBC3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SHKBP1Q8TBC3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.61■■■□□ 2.01
SHKBP1Q8TBC3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.61■■■□□ 2.01
SHKBP1Q8TBC3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SHKBP1Q8TBC3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
SHKBP1Q8TBC3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.6■■■□□ 2.01
SHKBP1Q8TBC3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.6■■■□□ 2.01
SHKBP1Q8TBC3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.6■■■□□ 2.01
SHKBP1Q8TBC3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SHKBP1Q8TBC3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SHKBP1Q8TBC3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SHKBP1Q8TBC3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SHKBP1Q8TBC3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.58■■■□□ 2.01
SHKBP1Q8TBC3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SHKBP1Q8TBC3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SHKBP1Q8TBC3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SHKBP1Q8TBC3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SHKBP1Q8TBC3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.57■■■□□ 2
SHKBP1Q8TBC3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.56■■■□□ 2
SHKBP1Q8TBC3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SHKBP1Q8TBC3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.55■■■□□ 2
SHKBP1Q8TBC3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SHKBP1Q8TBC3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.54■■■□□ 2
SHKBP1Q8TBC3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.54■■■□□ 2
SHKBP1Q8TBC3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.52■■■□□ 2
SHKBP1Q8TBC3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.51■■□□□ 1.99
SHKBP1Q8TBC3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SHKBP1Q8TBC3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SHKBP1Q8TBC3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SHKBP1Q8TBC3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SHKBP1Q8TBC3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SHKBP1Q8TBC3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SHKBP1Q8TBC3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
SHKBP1Q8TBC3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SHKBP1Q8TBC3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.49■■□□□ 1.99
SHKBP1Q8TBC3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.49■■□□□ 1.99
SHKBP1Q8TBC3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
SHKBP1Q8TBC3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SHKBP1Q8TBC3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L13-201ENST00000554103 1267 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L15-201ENST00000611059 1267 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L23-201ENST00000615195 1269 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L24-201ENST00000617576 1269 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L22-201ENST00000618238 1269 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L20-201ENST00000619712 1269 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L21-201ENST00000622058 1269 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L10-201ENST00000622460 1267 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 DUX4L25-201ENST00000624915 1269 ntBASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SHKBP1Q8TBC3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SHKBP1Q8TBC3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SHKBP1Q8TBC3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.45■■□□□ 1.99
SHKBP1Q8TBC3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.45■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms