Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.85■□□□□ 0.93
C3orf56Q8N813 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
C3orf56Q8N813 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.85■□□□□ 0.93
C3orf56Q8N813 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.85■□□□□ 0.93
C3orf56Q8N813 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C3orf56Q8N813 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.84■□□□□ 0.93
C3orf56Q8N813 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.84■□□□□ 0.93
C3orf56Q8N813 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C3orf56Q8N813 RNF126P1-201ENST00000567452 1320 ntBASIC20.82■□□□□ 0.92
C3orf56Q8N813 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C3orf56Q8N813 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C3orf56Q8N813 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.8■□□□□ 0.92
C3orf56Q8N813 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C3orf56Q8N813 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C3orf56Q8N813 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.79■□□□□ 0.92
C3orf56Q8N813 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.79■□□□□ 0.92
C3orf56Q8N813 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C3orf56Q8N813 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
C3orf56Q8N813 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
C3orf56Q8N813 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
C3orf56Q8N813 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
C3orf56Q8N813 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.78■□□□□ 0.92
C3orf56Q8N813 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
C3orf56Q8N813 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.77■□□□□ 0.92
C3orf56Q8N813 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
C3orf56Q8N813 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C3orf56Q8N813 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.76■□□□□ 0.91
C3orf56Q8N813 AC012354.3-201ENST00000623734 483 ntBASIC20.76■□□□□ 0.91
C3orf56Q8N813 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.75■□□□□ 0.91
C3orf56Q8N813 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C3orf56Q8N813 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C3orf56Q8N813 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C3orf56Q8N813 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C3orf56Q8N813 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
C3orf56Q8N813 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C3orf56Q8N813 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C3orf56Q8N813 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
C3orf56Q8N813 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
C3orf56Q8N813 NTF6A-201ENST00000591175 560 ntBASIC20.72■□□□□ 0.91
C3orf56Q8N813 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C3orf56Q8N813 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
C3orf56Q8N813 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
C3orf56Q8N813 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C3orf56Q8N813 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C3orf56Q8N813 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C3orf56Q8N813 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C3orf56Q8N813 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C3orf56Q8N813 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.68■□□□□ 0.9
C3orf56Q8N813 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C3orf56Q8N813 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
C3orf56Q8N813 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.67■□□□□ 0.9
C3orf56Q8N813 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.67■□□□□ 0.9
C3orf56Q8N813 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
C3orf56Q8N813 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C3orf56Q8N813 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.67■□□□□ 0.9
C3orf56Q8N813 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C3orf56Q8N813 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
C3orf56Q8N813 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
C3orf56Q8N813 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
C3orf56Q8N813 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
C3orf56Q8N813 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
C3orf56Q8N813 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C3orf56Q8N813 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.64■□□□□ 0.89
C3orf56Q8N813 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
C3orf56Q8N813 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
C3orf56Q8N813 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.63■□□□□ 0.89
C3orf56Q8N813 AC022413.1-201ENST00000624602 984 ntBASIC20.63■□□□□ 0.89
C3orf56Q8N813 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
C3orf56Q8N813 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
C3orf56Q8N813 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.61■□□□□ 0.89
C3orf56Q8N813 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C3orf56Q8N813 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C3orf56Q8N813 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C3orf56Q8N813 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.6■□□□□ 0.89
C3orf56Q8N813 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
C3orf56Q8N813 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.6■□□□□ 0.89
C3orf56Q8N813 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C3orf56Q8N813 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C3orf56Q8N813 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C3orf56Q8N813 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C3orf56Q8N813 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
C3orf56Q8N813 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C3orf56Q8N813 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C3orf56Q8N813 AL033527.3-201ENST00000566366 1196 ntBASIC20.58■□□□□ 0.89
C3orf56Q8N813 AC018358.1-201ENST00000631079 1402 ntBASIC20.58■□□□□ 0.88
C3orf56Q8N813 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf56Q8N813 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.57■□□□□ 0.88
C3orf56Q8N813 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.57■□□□□ 0.88
C3orf56Q8N813 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.57■□□□□ 0.88
C3orf56Q8N813 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf56Q8N813 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.56■□□□□ 0.88
C3orf56Q8N813 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
C3orf56Q8N813 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C3orf56Q8N813 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C3orf56Q8N813 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf56Q8N813 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C3orf56Q8N813 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf56Q8N813 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf56Q8N813 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.55■□□□□ 0.88
C3orf56Q8N813 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms