Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.62■■□□□ 1.69
CPSF7Q8N684 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CPSF7Q8N684 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CPSF7Q8N684 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CPSF7Q8N684 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.6■■□□□ 1.69
CPSF7Q8N684 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.6■■□□□ 1.69
CPSF7Q8N684 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPSF7Q8N684 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPSF7Q8N684 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CPSF7Q8N684 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CPSF7Q8N684 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CPSF7Q8N684 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CPSF7Q8N684 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPSF7Q8N684 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPSF7Q8N684 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPSF7Q8N684 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPSF7Q8N684 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.57■■□□□ 1.68
CPSF7Q8N684 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.57■■□□□ 1.68
CPSF7Q8N684 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CPSF7Q8N684 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPSF7Q8N684 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.56■■□□□ 1.68
CPSF7Q8N684 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPSF7Q8N684 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPSF7Q8N684 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CPSF7Q8N684 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.55■■□□□ 1.68
CPSF7Q8N684 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
CPSF7Q8N684 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CPSF7Q8N684 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPSF7Q8N684 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPSF7Q8N684 AL139393.2-201ENST00000608721 2025 ntBASIC25.52■■□□□ 1.68
CPSF7Q8N684 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CPSF7Q8N684 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
CPSF7Q8N684 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CPSF7Q8N684 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CPSF7Q8N684 SUZ12P1-203ENST00000578195 985 ntBASIC25.5■■□□□ 1.67
CPSF7Q8N684 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.49■■□□□ 1.67
CPSF7Q8N684 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPSF7Q8N684 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPSF7Q8N684 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPSF7Q8N684 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPSF7Q8N684 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
CPSF7Q8N684 DRD5P2-201ENST00000421395 2012 ntBASIC25.44■■□□□ 1.66
CPSF7Q8N684 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPSF7Q8N684 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPSF7Q8N684 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CPSF7Q8N684 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CPSF7Q8N684 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPSF7Q8N684 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPSF7Q8N684 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CPSF7Q8N684 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.41■■□□□ 1.66
CPSF7Q8N684 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.41■■□□□ 1.66
CPSF7Q8N684 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
CPSF7Q8N684 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPSF7Q8N684 AL133380.1-201ENST00000506013 324 ntBASIC25.39■■□□□ 1.66
CPSF7Q8N684 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CPSF7Q8N684 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPSF7Q8N684 CAHM-201ENST00000604200 896 ntBASIC25.37■■□□□ 1.65
CPSF7Q8N684 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CPSF7Q8N684 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CPSF7Q8N684 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CPSF7Q8N684 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPSF7Q8N684 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPSF7Q8N684 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPSF7Q8N684 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPSF7Q8N684 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.34■■□□□ 1.65
CPSF7Q8N684 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPSF7Q8N684 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPSF7Q8N684 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CPSF7Q8N684 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CPSF7Q8N684 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPSF7Q8N684 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CPSF7Q8N684 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CPSF7Q8N684 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CPSF7Q8N684 AL121749.1-202ENST00000609313 2153 ntBASIC25.32■■□□□ 1.64
CPSF7Q8N684 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPSF7Q8N684 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPSF7Q8N684 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
CPSF7Q8N684 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPSF7Q8N684 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CPSF7Q8N684 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.3■■□□□ 1.64
CPSF7Q8N684 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CPSF7Q8N684 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPSF7Q8N684 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPSF7Q8N684 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPSF7Q8N684 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPSF7Q8N684 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CPSF7Q8N684 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CPSF7Q8N684 AL391121.1-201ENST00000607967 1349 ntBASIC25.29■■□□□ 1.64
CPSF7Q8N684 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CPSF7Q8N684 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPSF7Q8N684 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.28■■□□□ 1.64
CPSF7Q8N684 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPSF7Q8N684 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CPSF7Q8N684 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPSF7Q8N684 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.26■■□□□ 1.63
CPSF7Q8N684 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPSF7Q8N684 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.25■■□□□ 1.63
CPSF7Q8N684 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CPSF7Q8N684 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.25■■□□□ 1.63
CPSF7Q8N684 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms