Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
FAM43AQ8N2R8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.8■■■□□ 2.68
FAM43AQ8N2R8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.79■■■□□ 2.68
FAM43AQ8N2R8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
FAM43AQ8N2R8 AC021231.2-201ENST00000594613 730 ntBASIC31.78■■■□□ 2.68
FAM43AQ8N2R8 MIR639-201ENST00000384974 98 ntBASIC31.77■■■□□ 2.68
FAM43AQ8N2R8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.75■■■□□ 2.67
FAM43AQ8N2R8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
FAM43AQ8N2R8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
FAM43AQ8N2R8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
FAM43AQ8N2R8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
FAM43AQ8N2R8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
FAM43AQ8N2R8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
FAM43AQ8N2R8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
FAM43AQ8N2R8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.72■■■□□ 2.67
FAM43AQ8N2R8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
FAM43AQ8N2R8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
FAM43AQ8N2R8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.71■■■□□ 2.67
FAM43AQ8N2R8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
FAM43AQ8N2R8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
FAM43AQ8N2R8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
FAM43AQ8N2R8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
FAM43AQ8N2R8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
FAM43AQ8N2R8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC31.66■■■□□ 2.66
FAM43AQ8N2R8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
FAM43AQ8N2R8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
FAM43AQ8N2R8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.65■■■□□ 2.66
FAM43AQ8N2R8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
FAM43AQ8N2R8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.64■■■□□ 2.66
FAM43AQ8N2R8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
FAM43AQ8N2R8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
FAM43AQ8N2R8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
FAM43AQ8N2R8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.63■■■□□ 2.65
FAM43AQ8N2R8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
FAM43AQ8N2R8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
FAM43AQ8N2R8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
FAM43AQ8N2R8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
FAM43AQ8N2R8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.6■■■□□ 2.65
FAM43AQ8N2R8 MIR3648-2-201ENST00000581792 180 ntBASIC31.6■■■□□ 2.65
FAM43AQ8N2R8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.6■■■□□ 2.65
FAM43AQ8N2R8 AC016575.1-201ENST00000607026 382 ntBASIC31.6■■■□□ 2.65
FAM43AQ8N2R8 MIR3648-1-201ENST00000615959 180 ntBASIC31.6■■■□□ 2.65
FAM43AQ8N2R8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
FAM43AQ8N2R8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
FAM43AQ8N2R8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
FAM43AQ8N2R8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
FAM43AQ8N2R8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.57■■■□□ 2.64
FAM43AQ8N2R8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
FAM43AQ8N2R8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
FAM43AQ8N2R8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
FAM43AQ8N2R8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
FAM43AQ8N2R8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
FAM43AQ8N2R8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
FAM43AQ8N2R8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.56■■■□□ 2.64
FAM43AQ8N2R8 MIR6090-201ENST00000622481 60 ntBASIC31.56■■■□□ 2.64
FAM43AQ8N2R8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
FAM43AQ8N2R8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
FAM43AQ8N2R8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
FAM43AQ8N2R8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
FAM43AQ8N2R8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
FAM43AQ8N2R8 HSD17B1P1-201ENST00000590052 955 ntBASIC31.54■■■□□ 2.64
FAM43AQ8N2R8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.54■■■□□ 2.64
FAM43AQ8N2R8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.53■■■□□ 2.64
FAM43AQ8N2R8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
FAM43AQ8N2R8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
FAM43AQ8N2R8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.52■■■□□ 2.64
FAM43AQ8N2R8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.52■■■□□ 2.64
FAM43AQ8N2R8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
FAM43AQ8N2R8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
FAM43AQ8N2R8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.49■■■□□ 2.63
FAM43AQ8N2R8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
FAM43AQ8N2R8 AC108673.1-201ENST00000510422 1159 ntBASIC31.48■■■□□ 2.63
FAM43AQ8N2R8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
FAM43AQ8N2R8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.47■■■□□ 2.63
FAM43AQ8N2R8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
FAM43AQ8N2R8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.46■■■□□ 2.63
FAM43AQ8N2R8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
FAM43AQ8N2R8 CR559946.2-201ENST00000623684 991 ntBASIC31.46■■■□□ 2.63
FAM43AQ8N2R8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.46■■■□□ 2.63
FAM43AQ8N2R8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
FAM43AQ8N2R8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 DUX4L11-201ENST00000611504 1267 ntBASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 DUX4L12-201ENST00000614593 1267 ntBASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 DUX4L14-201ENST00000621227 1267 ntBASIC31.45■■■□□ 2.63
FAM43AQ8N2R8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
FAM43AQ8N2R8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.43■■■□□ 2.62
FAM43AQ8N2R8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.43■■■□□ 2.62
FAM43AQ8N2R8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
FAM43AQ8N2R8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
FAM43AQ8N2R8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
FAM43AQ8N2R8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.41■■■□□ 2.62
FAM43AQ8N2R8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.4■■■□□ 2.62
FAM43AQ8N2R8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.4■■■□□ 2.62
FAM43AQ8N2R8 LINC01971-201ENST00000617888 1048 ntBASIC31.4■■■□□ 2.62
FAM43AQ8N2R8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
FAM43AQ8N2R8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.39■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms