Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.63■■■□□ 2.81
CHD1LQ86WJ1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
CHD1LQ86WJ1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CHD1LQ86WJ1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.62■■■□□ 2.81
CHD1LQ86WJ1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.61■■■□□ 2.81
CHD1LQ86WJ1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CHD1LQ86WJ1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHD1LQ86WJ1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1LQ86WJ1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CHD1LQ86WJ1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.6■■■□□ 2.81
CHD1LQ86WJ1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
CHD1LQ86WJ1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHD1LQ86WJ1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
CHD1LQ86WJ1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CHD1LQ86WJ1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CHD1LQ86WJ1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
CHD1LQ86WJ1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CHD1LQ86WJ1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CHD1LQ86WJ1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CHD1LQ86WJ1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CHD1LQ86WJ1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CHD1LQ86WJ1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CHD1LQ86WJ1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CHD1LQ86WJ1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CHD1LQ86WJ1 AL139393.2-201ENST00000608721 2025 ntBASIC32.53■■■□□ 2.8
CHD1LQ86WJ1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
CHD1LQ86WJ1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CHD1LQ86WJ1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.52■■■□□ 2.8
CHD1LQ86WJ1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.52■■■□□ 2.8
CHD1LQ86WJ1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.8
CHD1LQ86WJ1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CHD1LQ86WJ1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
CHD1LQ86WJ1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.5■■■□□ 2.79
CHD1LQ86WJ1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
CHD1LQ86WJ1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CHD1LQ86WJ1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CHD1LQ86WJ1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CHD1LQ86WJ1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.48■■■□□ 2.79
CHD1LQ86WJ1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CHD1LQ86WJ1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1LQ86WJ1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHD1LQ86WJ1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CHD1LQ86WJ1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
CHD1LQ86WJ1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.42■■■□□ 2.78
CHD1LQ86WJ1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CHD1LQ86WJ1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CHD1LQ86WJ1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.42■■■□□ 2.78
CHD1LQ86WJ1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CHD1LQ86WJ1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
CHD1LQ86WJ1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHD1LQ86WJ1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
CHD1LQ86WJ1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHD1LQ86WJ1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
CHD1LQ86WJ1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHD1LQ86WJ1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.39■■■□□ 2.78
CHD1LQ86WJ1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.38■■■□□ 2.77
CHD1LQ86WJ1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1LQ86WJ1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1LQ86WJ1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
CHD1LQ86WJ1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CHD1LQ86WJ1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CHD1LQ86WJ1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.35■■■□□ 2.77
CHD1LQ86WJ1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
CHD1LQ86WJ1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
CHD1LQ86WJ1 SUZ12P1-203ENST00000578195 985 ntBASIC32.33■■■□□ 2.77
CHD1LQ86WJ1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
CHD1LQ86WJ1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
CHD1LQ86WJ1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD1LQ86WJ1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD1LQ86WJ1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD1LQ86WJ1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.31■■■□□ 2.76
CHD1LQ86WJ1 MIR762-201ENST00000390236 83 ntBASIC32.31■■■□□ 2.76
CHD1LQ86WJ1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1LQ86WJ1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.31■■■□□ 2.76
CHD1LQ86WJ1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
CHD1LQ86WJ1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.3■■■□□ 2.76
CHD1LQ86WJ1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.29■■■□□ 2.76
CHD1LQ86WJ1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CHD1LQ86WJ1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CHD1LQ86WJ1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.28■■■□□ 2.76
CHD1LQ86WJ1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CHD1LQ86WJ1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.27■■■□□ 2.76
CHD1LQ86WJ1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
CHD1LQ86WJ1 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.24■■■□□ 2.75
CHD1LQ86WJ1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1LQ86WJ1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.23■■■□□ 2.75
CHD1LQ86WJ1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1LQ86WJ1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.23■■■□□ 2.75
CHD1LQ86WJ1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1LQ86WJ1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1LQ86WJ1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.21■■■□□ 2.75
CHD1LQ86WJ1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
CHD1LQ86WJ1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1LQ86WJ1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CHD1LQ86WJ1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHD1LQ86WJ1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.2■■■□□ 2.75
CHD1LQ86WJ1 DRD5P2-201ENST00000421395 2012 ntBASIC32.19■■■□□ 2.74
CHD1LQ86WJ1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CHD1LQ86WJ1 AC127502.1-201ENST00000399971 1502 ntBASIC32.19■■■□□ 2.74
CHD1LQ86WJ1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.19■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms