Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.75■■□□□ 1.23
RAI1Q7Z5J4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RAI1Q7Z5J4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.75■■□□□ 1.23
RAI1Q7Z5J4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RAI1Q7Z5J4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
RAI1Q7Z5J4 DUX4L11-201ENST00000611504 1267 ntBASIC22.74■■□□□ 1.23
RAI1Q7Z5J4 DUX4L12-201ENST00000614593 1267 ntBASIC22.74■■□□□ 1.23
RAI1Q7Z5J4 DUX4L14-201ENST00000621227 1267 ntBASIC22.74■■□□□ 1.23
RAI1Q7Z5J4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.74■■□□□ 1.23
RAI1Q7Z5J4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
RAI1Q7Z5J4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RAI1Q7Z5J4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RAI1Q7Z5J4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
RAI1Q7Z5J4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RAI1Q7Z5J4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RAI1Q7Z5J4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RAI1Q7Z5J4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RAI1Q7Z5J4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RAI1Q7Z5J4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RAI1Q7Z5J4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
RAI1Q7Z5J4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.7■■□□□ 1.23
RAI1Q7Z5J4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.23
RAI1Q7Z5J4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAI1Q7Z5J4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RAI1Q7Z5J4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.69■■□□□ 1.22
RAI1Q7Z5J4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAI1Q7Z5J4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.69■■□□□ 1.22
RAI1Q7Z5J4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RAI1Q7Z5J4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RAI1Q7Z5J4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RAI1Q7Z5J4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.67■■□□□ 1.22
RAI1Q7Z5J4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAI1Q7Z5J4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.65■■□□□ 1.22
RAI1Q7Z5J4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.65■■□□□ 1.22
RAI1Q7Z5J4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RAI1Q7Z5J4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RAI1Q7Z5J4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAI1Q7Z5J4 HSD17B1P1-201ENST00000590052 955 ntBASIC22.63■■□□□ 1.21
RAI1Q7Z5J4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAI1Q7Z5J4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.62■■□□□ 1.21
RAI1Q7Z5J4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAI1Q7Z5J4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAI1Q7Z5J4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAI1Q7Z5J4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAI1Q7Z5J4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RAI1Q7Z5J4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RAI1Q7Z5J4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAI1Q7Z5J4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L13-201ENST00000554103 1267 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L15-201ENST00000611059 1267 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L23-201ENST00000615195 1269 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L24-201ENST00000617576 1269 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L22-201ENST00000618238 1269 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L20-201ENST00000619712 1269 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L21-201ENST00000622058 1269 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L10-201ENST00000622460 1267 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 DUX4L25-201ENST00000624915 1269 ntBASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.57■■□□□ 1.2
RAI1Q7Z5J4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAI1Q7Z5J4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAI1Q7Z5J4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.54■■□□□ 1.2
RAI1Q7Z5J4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RAI1Q7Z5J4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.54■■□□□ 1.2
RAI1Q7Z5J4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.54■■□□□ 1.2
RAI1Q7Z5J4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.54■■□□□ 1.2
RAI1Q7Z5J4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI1Q7Z5J4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAI1Q7Z5J4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAI1Q7Z5J4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAI1Q7Z5J4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAI1Q7Z5J4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RAI1Q7Z5J4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RAI1Q7Z5J4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAI1Q7Z5J4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.51■■□□□ 1.19
RAI1Q7Z5J4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI1Q7Z5J4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.5■■□□□ 1.19
RAI1Q7Z5J4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI1Q7Z5J4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAI1Q7Z5J4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RAI1Q7Z5J4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.5■■□□□ 1.19
RAI1Q7Z5J4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RAI1Q7Z5J4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAI1Q7Z5J4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.49■■□□□ 1.19
RAI1Q7Z5J4 AL161658.1-201ENST00000623641 1967 ntBASIC22.49■■□□□ 1.19
RAI1Q7Z5J4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.49■■□□□ 1.19
RAI1Q7Z5J4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RAI1Q7Z5J4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.48■■□□□ 1.19
RAI1Q7Z5J4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.48■■□□□ 1.19
RAI1Q7Z5J4 LINC00273-201ENST00000539813 1452 ntBASIC22.48■■□□□ 1.19
RAI1Q7Z5J4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAI1Q7Z5J4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
RAI1Q7Z5J4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms